RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 ITM2CQ9NQX7 267 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 DDX19AQ9NUU7 478 aaKnown RBP6.98□□□□□ -1.29
SMC4-217ENST00000485867 KLHL14Q9P2G3 628 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 GTF3C4Q9UKN8 822 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 L1RE1Q9UN81 338 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 ANKRD6Q9Y2G4 727 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 DERAQ9Y315 318 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 PCDHB6Q9Y5E3 794 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 KIF26BQ2KJY2 2108 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 KPNA7A9QM74 516 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 WASH3PC4AMC7 463 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 PRRT4C9JH25 899 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 SHOXO15266 292 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 CDKL5O76039 1030 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 IGLV3-19P01714 112 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 MBL2P11226 248 aaPredicted RBP6.97□□□□□ -1.29
SMC4-217ENST00000485867 VAV1P15498 845 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 PSMA5P28066 241 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 CDC25AP30304 524 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 OXTRP30559 389 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 MAGEA11P43364 429 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 TPMTP51580 245 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 NFATC3Q12968 1075 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 KCNT1Q5JUK3 1230 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 RINT1Q6NUQ1 792 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 C1orf186Q6ZWK4 172 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 OSTM1Q86WC4 334 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 TMEM25Q86YD3 366 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 SPATA2LQ8IUW3 424 aaPredicted RBP6.97□□□□□ -1.29
SMC4-217ENST00000485867 SCFD1Q8WVM8 642 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 SNX19Q92543 992 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 BICD1Q96G01 975 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 CNDP2Q96KP4 475 aaKnown RBP6.97□□□□□ -1.29
SMC4-217ENST00000485867 SPATA17Q96L03 361 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 ZNF560Q96MR9 790 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 CDADC1Q9BWV3 514 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 PCED1AQ9H1Q7 454 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 TM9SF3Q9HD45 589 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 SPHK2Q9NRA0 654 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 AP5S1Q9NUS5 200 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 DNAJC17Q9NVM6 304 aaKnown RBP6.97□□□□□ -1.29
SMC4-217ENST00000485867 DDX43Q9NXZ2 648 aaKnown RBP6.97□□□□□ -1.29
SMC4-217ENST00000485867 SUCOQ9UBS9 1254 aaKnown RBP6.97□□□□□ -1.29
SMC4-217ENST00000485867 CPSF3Q9UKF6 684 aaKnown RBP6.97□□□□□ -1.29
SMC4-217ENST00000485867 ACSL6Q9UKU0 697 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 C2CD2Q9Y426 696 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 HEMK1Q9Y5R4 338 aaPredicted RBP6.97□□□□□ -1.29
SMC4-217ENST00000485867 BOD1L1Q8NFC6 3051 aa6.97□□□□□ -1.29
SMC4-217ENST00000485867 BSNQ9UPA5 3926 aa6.96□□□□□ -1.29
SMC4-217ENST00000485867 A0A0B4J269 797 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 A0A1B0GTQ1 180 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 E9PMD0 336 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 LAD1O00515 517 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 HCRTO43612 131 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 CACNG3O60359 315 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 LDOC1O95751 146 aaPredicted RBP6.96□□□□□ -1.3
SMC4-217ENST00000485867 MPOP05164 745 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 OR52Z1P0C646 297 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 PLS3P13797 630 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 ARL4AP40617 200 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 PPP3CCP48454 512 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 LIG4P49917 911 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 MYL7Q01449 175 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 LAPTM5Q13571 262 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 STARD3Q14849 445 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 ANO4Q32M45 955 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 KIAA1614Q5VZ46 1190 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 DENND5BQ6ZUT9 1274 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 RUFY3Q7L099 469 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 GATAD2AQ86YP4 633 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 BBS7Q8IWZ6 715 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 DHX40Q8IX18 779 aaKnown RBP6.96□□□□□ -1.3
SMC4-217ENST00000485867 DIS3L2Q8IYB7 885 aaKnown RBP6.96□□□□□ -1.3
SMC4-217ENST00000485867 DCBLD1Q8N8Z6 715 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 TMEM52Q8NDY8 209 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 MZB1Q8WU39 189 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 RFFLQ8WZ73 363 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 CEP295NLQ96MC4 621 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 ZNF578Q96N58 590 aaPredicted RBP6.96□□□□□ -1.3
SMC4-217ENST00000485867 SPON2Q9BUD6 331 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 NUP58Q9BVL2 599 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 TRIM9Q9C026 710 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 ASB7Q9H672 318 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 C6orf106Q9H6K1 298 aaPredicted RBP6.96□□□□□ -1.3
SMC4-217ENST00000485867 TNFRSF12AQ9NP84 129 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 DPP3Q9NY33 737 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 ORC3Q9UBD5 711 aaPredicted RBP6.96□□□□□ -1.3
SMC4-217ENST00000485867 STON1Q9Y6Q2 735 aa6.96□□□□□ -1.3
SMC4-217ENST00000485867 NEDD8-MDP1E9PL57 170 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 GABRDO14764 452 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 HNRNPDLO14979 420 aaKnown RBP6.95□□□□□ -1.3
SMC4-217ENST00000485867 KLK10O43240 276 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 DFNA5O60443 496 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 HUS1O60921 280 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 CTDNEP1O95476 244 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 PIGRP01833 764 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 PRKCAP17252 672 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 BDNFP23560 247 aa6.95□□□□□ -1.3
SMC4-217ENST00000485867 GUCY2CP25092 1073 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms