RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 WFIKKN2Q8TEU8 576 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 ACDQ96AP0 544 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 MYO19Q96H55 970 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 CAPZA3Q96KX2 299 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 QKIQ96PU8 341 aaKnown RBP eCLIP16.19■□□□□ 0.18
APOE-205ENST00000485628 PNKPQ96T60 521 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 LGMNQ99538 433 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 HOMER3Q9NSC5 361 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 IPO11Q9UI26 975 aaKnown RBP16.19■□□□□ 0.18
APOE-205ENST00000485628 DNPEPQ9ULA0 475 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 SHROOM3Q8TF72 1996 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.18■□□□□ 0.18
APOE-205ENST00000485628 J3KR12 359 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 TIMM44O43615 452 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 MAP3K6O95382 1288 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 GLDCP23378 1020 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 GRIA2P42262 883 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 IL10RBQ08334 325 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 SLC45A4Q5BKX6 768 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 TJAP1Q5JTD0 557 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 GRAMD4Q6IC98 578 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 TTC27Q6P3X3 843 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 SFTPA1Q8IWL2 248 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 UBALD2Q8IYN6 164 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 TEX26Q8N6G2 289 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 C1orf54Q8WWF1 131 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 ATG4AQ8WYN0 398 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 HAUS1Q96CS2 278 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 RTP4Q96DX8 246 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 ZNF419Q96HQ0 510 aaPredicted RBP16.18■□□□□ 0.18
APOE-205ENST00000485628 MRGPRX3Q96LB0 322 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 AP1M1Q9BXS5 423 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 VPS51Q9UID3 782 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 HS3ST2Q9Y278 367 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 NEU2Q9Y3R4 380 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 PIAS3Q9Y6X2 628 aa16.18■□□□□ 0.18
APOE-205ENST00000485628 K7EQS6 105 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 MATN3O15232 486 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 SNAP91O60641 907 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 KAT7O95251 611 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 ITGAVP06756 1048 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 RBP3P10745 1247 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 VAV1P15498 845 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 TNFRSF4P43489 277 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 STARD6P59095 220 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 EIF3EP60228 445 aaKnown RBP16.17■□□□□ 0.18
APOE-205ENST00000485628 ENPP2Q13822 863 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 BYSLQ13895 437 aaKnown RBP16.17■□□□□ 0.18
APOE-205ENST00000485628 EIF4HQ15056 248 aaKnown RBP16.17■□□□□ 0.18
APOE-205ENST00000485628 PTPRNQ16849 979 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 PREPLQ4J6C6 727 aaPredicted RBP16.17■□□□□ 0.18
APOE-205ENST00000485628 MBLAC2Q68D91 279 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 FSTL4Q6MZW2 842 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.17■□□□□ 0.18
APOE-205ENST00000485628 CCDC33Q8N5R6 958 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 KDM1BQ8NB78 822 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 SPATA4Q8NEY3 305 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 SLCO2A1Q92959 643 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 ZNF599Q96NL3 588 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 IL12RB2Q99665 862 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 P2RY13Q9BPV8 354 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 FAM118BQ9BPY3 351 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 MUC3BQ9H195 1237 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 ATP13A1Q9HD20 1204 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 ELOVL2Q9NXB9 296 aa16.17■□□□□ 0.18
APOE-205ENST00000485628 KRBA1A5PL33 1030 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 ZSCAN5CA6NGD5 496 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 CCDC188H7C350 402 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 DFFAO00273 331 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 KRIT1O00522 736 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 PPP1R12AO14974 1030 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 PHF2O75151 1096 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 ZNF821O75541 412 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 HNRNPLP14866 589 aaKnown RBP eCLIP16.16■□□□□ 0.18
APOE-205ENST00000485628 COILP38432 576 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 KIR2DL1P43626 348 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 IFI35P80217 286 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 PRKCQQ04759 706 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 SULT2A1Q06520 285 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 SLC20A2Q08357 652 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 WASHC5Q12768 1159 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 FZD5Q13467 585 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 HNRNPDQ14103 355 aaKnown RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 MLF2Q15773 248 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 INO80DQ53TQ3 878 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 ZC3H18Q86VM9 953 aaKnown RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 CCDC117Q8IWD4 279 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 LRRN4Q8WUT4 740 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 TFB1MQ8WVM0 346 aaKnown RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 VOPP1Q96AW1 172 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 C2orf49Q9BVC5 232 aaPredicted RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 RBM12Q9NTZ6 932 aaKnown RBP16.16■□□□□ 0.18
APOE-205ENST00000485628 PCYOX1Q9UHG3 505 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 VPS28Q9UK41 221 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 MUC3AQ02505 3323 aa16.16■□□□□ 0.18
APOE-205ENST00000485628 ANTXRLA6NF34 631 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 MCF2LO15068 1137 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 ATP9BO43861 1147 aa16.15■□□□□ 0.18
APOE-205ENST00000485628 MT-CO1P00395 513 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms