RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 TUBP50607 506 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 PLCD1P51178 756 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 NR1H2P55055 460 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 CAMK1Q14012 370 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 ERV3-1Q14264 604 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 KCTD2Q14681 263 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 LY6KQ17RY6 165 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 CBWD5Q5RIA9 395 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 TREML2Q5T2D2 321 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 ANKRD40Q6AI12 368 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 ACSM6Q6P461 480 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 PTCHD4Q6ZW05 846 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 NEK10Q6ZWH5 1172 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 METTL25Q8N6Q8 603 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 NRACQ8N912 160 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 FAM71DQ8N9W8 422 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 SRFBP1Q8NEF9 429 aaKnown RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 OR52L2PQ8NGH6 319 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 MYCBPAPQ8TBZ2 947 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 LPIN2Q92539 896 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 CENPIQ92674 756 aaPredicted RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 ZUFSPQ96AP4 578 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 RRP36Q96EU6 259 aaKnown RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 PBKQ96KB5 322 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 NPAS1Q99742 590 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 OSBPL5Q9H0X9 879 aaPredicted RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 PLEKHA5Q9HAU0 1116 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 TXLNGQ9NUQ3 528 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 AASSQ9UDR5 926 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 AMFRQ9UKV5 643 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 GABRQQ9UN88 632 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 CYP46A1Q9Y6A2 500 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 C9orf84Q5VXU9 1444 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 EP400Q96L91 3159 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 PKD1L2Q7Z442 2459 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 TARM1B6A8C7 271 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 ZNF213O14771 459 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 KLK10O43240 276 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 TIMM44O43615 452 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 CCNT1O60563 726 aaKnown RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 TJP3O95049 919 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 TBX18O95935 607 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 ALPLP05186 524 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 FESP07332 822 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 IL6RP08887 468 aaPredicted RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 ATP1A3P13637 1013 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 ZFXP17010 805 aaPredicted RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 PSMA4P25789 261 aaKnown RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 DUSP1P28562 367 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 CCDC15Q0P6D6 951 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 PDCLQ13371 301 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 DNASE1L3Q13609 305 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 THOC5Q13769 683 aaKnown RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 FAM187BQ17R55 369 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 FAM153CQ494X1 144 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 ITPRIPL1Q6GPH6 555 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 ZNF551Q7Z340 670 aaPredicted RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 ABHD11Q8NFV4 315 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 R3HDM4Q96D70 268 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 RNF125Q96EQ8 232 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 RBM17Q96I25 401 aaKnown RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 CD180Q99467 661 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 MECRQ9BV79 373 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 RNF26Q9BY78 433 aaPredicted RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 ACAD9Q9H845 621 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 VEZTQ9HBM0 779 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 BLOC1S4Q9NUP1 217 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 NSMCE4AQ9NXX6 385 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 ORC3Q9UBD5 711 aaPredicted RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 SLC12A4Q9UP95 1085 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 NPHP4O75161 1426 aaPredicted RBP4.27□□□□□ -1.73
VPS8-223ENST00000485024 ABCA8O94911 1581 aa4.27□□□□□ -1.73
VPS8-223ENST00000485024 ADGRA2Q96PE1 1338 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 C3P01024 1663 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 GOLGA6L10A0A0M3HER8 536 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 GCOM1H8Y6P7 765 aaPredicted RBP4.26□□□□□ -1.73
VPS8-223ENST00000485024 PEX12O00623 359 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 CES2O00748 559 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 CHRM2P08172 466 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 NPSP0C0P6 89 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 WEE2P0C1S8 567 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 TMIGD3P0DMS9 266 aaPredicted RBP4.26□□□□□ -1.73
VPS8-223ENST00000485024 CHN1P15882 459 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 NDUFB7P17568 137 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 RPS6KB1P23443 525 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 PRKCHP24723 683 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 RCAN1P53805 252 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 RPL15P61313 204 aaKnown RBP4.26□□□□□ -1.73
VPS8-223ENST00000485024 RPP30P78346 268 aaKnown RBP4.26□□□□□ -1.73
VPS8-223ENST00000485024 GLE1Q53GS7 698 aaKnown RBP4.26□□□□□ -1.73
VPS8-223ENST00000485024 ZNF484Q5JVG2 852 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 PXDC1Q5TGL8 231 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 CCDC30Q5VVM6 783 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 ANKRD16Q6P6B7 361 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 FASTKD5Q7L8L6 764 aaKnown RBP4.26□□□□□ -1.73
VPS8-223ENST00000485024 MAVSQ7Z434 540 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 SFTPA1Q8IWL2 248 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 ZMIZ2Q8NF64 920 aa4.26□□□□□ -1.73
VPS8-223ENST00000485024 TDRD7Q8NHU6 1098 aaKnown RBP4.26□□□□□ -1.73
VPS8-223ENST00000485024 NPIPB3Q92617 1050 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms