RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 LEKR1Q6ZMV7 388 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 SH2D3CQ8N5H7 860 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 ZNF564Q8TBZ8 553 aaPredicted RBP16.62■□□□□ 0.25
DDR1-246ENST00000485023 CTNNBL1Q8WYA6 563 aaPredicted RBP16.62■□□□□ 0.25
DDR1-246ENST00000485023 PTPRN2Q92932 1015 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 CCDC42Q96M95 316 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 HSPA12BQ96MM6 686 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 KCTD15Q96SI1 283 aaPredicted RBP16.62■□□□□ 0.25
DDR1-246ENST00000485023 RSPH9Q9H1X1 276 aaPredicted RBP16.62■□□□□ 0.25
DDR1-246ENST00000485023 ZWILCHQ9H900 591 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 FBRSQ9HAH7 460 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 ITM2CQ9NQX7 267 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 CTTNBP2NLQ9P2B4 639 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 ACTL7AQ9Y615 435 aa16.62■□□□□ 0.25
DDR1-246ENST00000485023 OTOGLQ3ZCN5 2332 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 SSU72P8A0A1W2PR75 194 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 TARSL2A2RTX5 802 aaKnown RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 EEF2KO00418 725 aaKnown RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 MID1O15344 667 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 SMAD6O43541 496 aaKnown RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 RAMP2O60895 175 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 RNASEH1O60930 286 aaKnown RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 TGM1P22735 817 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 SSR1P43307 286 aaKnown RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 ARF5P84085 180 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 SEMA3BQ13214 749 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 CST6Q15828 149 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 ASTE1Q2TB18 679 aaPredicted RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 POM121L1PQ3SYA9 428 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 TTC31Q49AM3 519 aaPredicted RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 ERMARDQ5T6L9 678 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 ZNF783Q6ZMS7 281 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 CYP4V2Q6ZWL3 525 aaPredicted RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 METTL3Q86U44 580 aaKnown RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 CPNE8Q86YQ8 564 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 SLC41A1Q8IVJ1 513 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 RTL3Q8N8U3 475 aaKnown RBP16.61■□□□□ 0.25
DDR1-246ENST00000485023 TC2NQ8N9U0 490 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 FRS2Q8WU20 508 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 HSPH1Q92598 858 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 TNKS2Q9H2K2 1166 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 IP6K2Q9UHH9 426 aa16.61■□□□□ 0.25
DDR1-246ENST00000485023 BCLAF3A2AJT9 711 aaKnown RBP16.6■□□□□ 0.25
DDR1-246ENST00000485023 TMEM110-MUSTN1A8MSY1 372 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 PATE3B3GLJ2 98 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 ATP9BO43861 1147 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 IL1BP01584 269 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 H2AFZP0C0S5 128 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 ITPKAP23677 461 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 IL1R2P27930 398 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 GJC1P36383 396 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 ZNF33AQ06730 810 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 CSRP2Q16527 193 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 PRR23CQ6ZRP0 262 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 H2AFVQ71UI9 128 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 C12orf50Q8NA57 414 aaPredicted RBP16.6■□□□□ 0.25
DDR1-246ENST00000485023 ARHGEF2Q92974 986 aaKnown RBP16.6■□□□□ 0.25
DDR1-246ENST00000485023 MRFAP1L1Q96HT8 127 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 FAM129BQ96TA1 746 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 PABPC3Q9H361 631 aaKnown RBP16.6■□□□□ 0.25
DDR1-246ENST00000485023 CATSPERBQ9H7T0 1116 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 WSB2Q9NYS7 404 aaPredicted RBP16.6■□□□□ 0.25
DDR1-246ENST00000485023 SERGEFQ9UGK8 458 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 HS3ST2Q9Y278 367 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 FCF1Q9Y324 198 aaKnown RBP16.6■□□□□ 0.25
DDR1-246ENST00000485023 PCDHGA5Q9Y5G8 931 aa16.6■□□□□ 0.25
DDR1-246ENST00000485023 NYNRINQ9P2P1 1898 aaKnown RBP16.6■□□□□ 0.25
DDR1-246ENST00000485023 A0A1W2PP55 124 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 MEI4A8MW99 385 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 PLK4O00444 970 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 DAPK3O43293 454 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 RNASEH2AO75792 299 aaKnown RBP16.59■□□□□ 0.25
DDR1-246ENST00000485023 ZMPSTE24O75844 475 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 GOT1P17174 413 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 OXTRP30559 389 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 SLC8A1P32418 973 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 ACSL1P33121 698 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 DNA2P51530 1060 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 METAP1P53582 386 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 PIGHQ14442 188 aaPredicted RBP16.59■□□□□ 0.25
DDR1-246ENST00000485023 ELAVL3Q14576 367 aaKnown RBP16.59■□□□□ 0.25
DDR1-246ENST00000485023 POLD3Q15054 466 aaPredicted RBP16.59■□□□□ 0.25
DDR1-246ENST00000485023 AASDHQ4L235 1098 aaPredicted RBP16.59■□□□□ 0.25
DDR1-246ENST00000485023 TXNRD3NBQ6F5E7 133 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 RETSATQ6NUM9 610 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 C22orf39Q6P5X5 142 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 RGL4Q8IZJ4 473 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 NETO2Q8NC67 525 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 OR8D1Q8WZ84 308 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 SNX19Q92543 992 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 HMCESQ96FZ2 354 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 CELF6Q96J87 481 aaKnown RBP16.59■□□□□ 0.25
DDR1-246ENST00000485023 NOL6Q9H6R4 1146 aaKnown RBP16.59■□□□□ 0.25
DDR1-246ENST00000485023 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDR1-246ENST00000485023 TMEM74BQ9NUR3 256 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 FBXL12Q9NXK8 326 aa16.59■□□□□ 0.25
DDR1-246ENST00000485023 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.25
DDR1-246ENST00000485023 WDR87Q6ZQQ6 2873 aa16.58■□□□□ 0.25
DDR1-246ENST00000485023 FAM47DPA6NHR8 397 aa16.58■□□□□ 0.24
DDR1-246ENST00000485023 MYO1FO00160 1098 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms