RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 KIF5AQ12840 1032 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 MYO1EQ12965 1108 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 DRP2Q13474 957 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 BIRC3Q13489 604 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 TRPC3Q13507 836 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 BFSP2Q13515 415 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 ITGA7Q13683 1181 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 BMS1Q14692 1282 aaKnown RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 TMEM132DQ14C87 1099 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 PTPN14Q15678 1187 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 SLC18A3Q16572 532 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 PTGISQ16647 500 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 ARHGAP44Q17R89 818 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CBWD6Q4V339 395 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 ARHGAP29Q52LW3 1261 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 ZC3H12BQ5HYM0 836 aaKnown RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CBWD3Q5JTY5 395 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CBWD5Q5RIA9 395 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CCSAPQ6IQ19 270 aaPredicted RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 FBXO42Q6P3S6 717 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 TRIM72Q6ZMU5 477 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 C15orf39Q6ZRI6 1047 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 KIAA1328Q86T90 577 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 RNF10Q8N5U6 811 aaKnown RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 LILRA3Q8N6C8 439 aaPredicted RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 TRAPPC12Q8WVT3 735 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 APBB2Q92870 758 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CCDC127Q96BQ5 260 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 SAAL1Q96ER3 474 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 ZNF560Q96MR9 790 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 ALS2CR12Q96Q35 445 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 FDXACB1Q9BRP7 624 aaPredicted RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 NDC1Q9BTX1 674 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 FTHL17Q9BXU8 183 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CPEB1Q9BZB8 566 aaKnown RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 MIS12Q9H081 205 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 TMEM117Q9H0C3 514 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 FAM49AQ9H0Q0 323 aaPredicted RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CDT1Q9H211 546 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 GANQ9H2C0 597 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 PCIF1Q9H4Z3 704 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 PDZD7Q9H5P4 517 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 HAUS4Q9H6D7 363 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 NHEJ1Q9H9Q4 299 aaPredicted RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 RSAD1Q9HA92 442 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CYP3A43Q9HB55 503 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 ING3Q9NXR8 418 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 TRPM5Q9NZQ8 1165 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 HDAC6Q9UBN7 1215 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 PPP2R2CQ9Y2T4 447 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 TRIM17Q9Y577 477 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 CEP83Q9Y592 693 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 EPN1Q9Y6I3 576 aaPredicted RBP4.56□□□□□ -1.68
SPTA1-206ENST00000484520 KIAA1217Q5T5P2 1943 aa4.56□□□□□ -1.68
SPTA1-206ENST00000484520 TMEM200CA6NKL6 621 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 MED7O43513 233 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 RPS6KA5O75582 802 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 NOL4O94818 638 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PGK1P00558 417 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 ASS1P00966 412 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 TRIM49P0CI25 452 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 TRIM49CP0CI26 452 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 STAG3L1P0CL83 205 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 MYBL1P10243 752 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 KCNE1P15382 129 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 ZSCAN20P17040 1043 aaPredicted RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 ARF4P18085 180 aaPredicted RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 CCND3P30281 292 aaPredicted RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 GCLMP48507 274 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 ACOT2P49753 483 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PDE6CP51160 858 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 VAV2P52735 878 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 TERF1P54274 439 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 SNX16P57768 344 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 NOP14P78316 857 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 RBP5P82980 135 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 BEX3Q00994 111 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PPP3CAQ08209 521 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 LRMPQ12912 555 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 RAPGEF1Q13905 1077 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 CLUL1Q15846 466 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 TDRD12Q587J7 1177 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 DNTTIP2Q5QJE6 756 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 TMEM63BQ5T3F8 832 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PAPD7Q5XG87 772 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 CXCL17Q6UXB2 119 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 TMEM139Q8IV31 216 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 ARHGEF19Q8IW93 802 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 CMTR2Q8IYT2 770 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PPM1KQ8N3J5 372 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 LRRC52Q8N7C0 313 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 GLB1L3Q8NCI6 653 aaPredicted RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 MSANTD4Q8NCY6 345 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 BEST2Q8NFU1 509 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 TRIM58Q8NG06 486 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 OR52N2Q8NGI0 321 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 KIF18AQ8NI77 898 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 SPATA18Q8TC71 538 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 DNAJB3Q8WWF6 145 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms