RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	MAFK	O60675	156 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	GRIA2	P42262	883 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	OXCT1	P55809	520 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	ARF5	P84085	180 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	FSTL4	Q6MZW2	842 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	UBALD2	Q8IYN6	164 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	CYB5D2	Q8WUJ1	264 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	FAM3C	Q92520	227 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	ZDHHC4	Q9NPG8	344 aa		28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	IPO11	Q9UI26	975 aa	Known RBP	28.25	■■■□□ 2.11
TPRA1-208	ENST00000483868	MT-CO1	P00395	513 aa		28.24	■■■□□ 2.11
TPRA1-208	ENST00000483868	TMEM196	Q5HYL7	178 aa		28.24	■■■□□ 2.11
TPRA1-208	ENST00000483868	EMC10	Q5UCC4	262 aa		28.24	■■■□□ 2.11
TPRA1-208	ENST00000483868	PRELID2	Q8N945	189 aa		28.24	■■■□□ 2.11
TPRA1-208	ENST00000483868	DCAF4L2	Q8NA75	395 aa		28.24	■■■□□ 2.11
TPRA1-208	ENST00000483868	RPL10L	Q96L21	214 aa	Known RBP	28.24	■■■□□ 2.11
TPRA1-208	ENST00000483868	CIPC	Q9C0C6	399 aa		28.24	■■■□□ 2.11
TPRA1-208	ENST00000483868	DNPEP	Q9ULA0	475 aa		28.24	■■■□□ 2.11
TPRA1-208	ENST00000483868		K7EQS6	105 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	KDELR3	O43731	214 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	CD160	O95971	181 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	EGF	P01133	1207 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	APOD	P05090	189 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	KCTD19	Q17RG1	926 aa	Predicted RBP	28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	SIX5	Q8N196	739 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	ATPAF2	Q8N5M1	289 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	CCNY	Q8ND76	341 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	TTC17	Q96AE7	1141 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	ELOVL2	Q9NXB9	296 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868		A0A0A0MRY4	1105 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	STK19	P49842	368 aa	Predicted RBP	28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	EIF3E	P60228	445 aa	Known RBP	28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	SNX1	Q13596	522 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	PDF	Q9HBH1	243 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	CDC23	Q9UJX2	597 aa		28.23	■■■□□ 2.11
TPRA1-208	ENST00000483868	PEX11B	O96011	259 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	POLR2E	P19388	210 aa	Known RBP	28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	MX2	P20592	715 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	ETFB	P38117	255 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	ZXDA	P98168	799 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	DMC1	Q14565	340 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	PDK1	Q15118	436 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	SLC35B2	Q8TB61	432 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	WFIKKN2	Q8TEU8	576 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	HDAC11	Q96DB2	347 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	ZNF419	Q96HQ0	510 aa	Predicted RBP	28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	C2orf49	Q9BVC5	232 aa	Predicted RBP	28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	NDRG2	Q9UN36	371 aa	Known RBP	28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868	RAD54B	Q9Y620	910 aa		28.22	■■■□□ 2.11
TPRA1-208	ENST00000483868		K7ERQ8	282 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	PRAMEF11	O60813	436 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	RBP3	P10745	1247 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	VAV1	P15498	845 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	AP1B1	Q10567	949 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	PTPRN	Q16849	979 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	TTC13	Q8NBP0	860 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	MTF2	Q9Y483	593 aa	Predicted RBP	28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	MRFAP1	Q9Y605	127 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868		H7C0C1	242 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	KRIT1	O00522	736 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	LIAS	O43766	372 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	ATP5O	P48047	213 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	NRL	P54845	237 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	SEC13	P55735	322 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	ECT2L	Q008S8	904 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	PPID	Q08752	370 aa	Known RBP	28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	PRKD1	Q15139	912 aa	Predicted RBP	28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	MRGPRX3	Q96LB0	322 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	TSGA13	Q96PP4	275 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	NAP1L3	Q99457	506 aa	Predicted RBP	28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	SP110	Q9HB58	689 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	RBM12	Q9NTZ6	932 aa	Known RBP	28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	SLCO3A1	Q9UIG8	710 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	HPCAL4	Q9UM19	191 aa		28.21	■■■□□ 2.11
TPRA1-208	ENST00000483868	NCAM2	O15394	837 aa		28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	CHRM1	P11229	460 aa	Predicted RBP	28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	PRKCQ	Q04759	706 aa		28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	GRSF1	Q12849	480 aa	Known RBP eCLIP	28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	ZNF852	Q6ZMS4	543 aa		28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	BZW1	Q7L1Q6	419 aa	Known RBP	28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	ZNF687	Q8N1G0	1237 aa		28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	TFB1M	Q8WVM0	346 aa	Known RBP	28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	MAIP1	Q8WWC4	291 aa		28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	ACD	Q96AP0	544 aa		28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	MSANTD3	Q96H12	275 aa		28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	MYO19	Q96H55	970 aa		28.2	■■■□□ 2.1
TPRA1-208	ENST00000483868	KCNK1	O00180	336 aa		28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	PPP1R12A	O14974	1030 aa	Predicted RBP	28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	MCF2L	O15068	1137 aa		28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	SMAD6	O43541	496 aa	Known RBP	28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	RBL1	P28749	1068 aa		28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	KCNJ1	P48048	391 aa		28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	STARD6	P59095	220 aa		28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	DNTTIP2	Q5QJE6	756 aa	Known RBP	28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	SUGP1	Q8IWZ8	645 aa	Known RBP	28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	QKI	Q96PU8	341 aa	Known RBP eCLIP	28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	FOXQ1	Q9C009	403 aa		28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	RNF14	Q9UBS8	474 aa		28.19	■■■□□ 2.1
TPRA1-208	ENST00000483868	ERVW-1	Q9UQF0	538 aa		28.19	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms