RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 RAB6CQ53S08 254 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 FAM46CQ5VWP2 391 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 RWDD4Q6NW29 188 aaKnown RBP14.23□□□□□ -0.13
VARS-225ENST00000482996 SLFN11Q7Z7L1 901 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 ZCCHC9Q8N567 271 aaKnown RBP14.23□□□□□ -0.13
VARS-225ENST00000482996 SH2D3CQ8N5H7 860 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 ATP11CQ8NB49 1132 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 FRS2Q8WU20 508 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 IQCDQ96DY2 449 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 CCDC114Q96M63 670 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 PSMB7Q99436 277 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 SPON2Q9BUD6 331 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 RAB6CQ9H0N0 254 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 PARVAQ9NVD7 372 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 TAS2R14Q9NYV8 317 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 EIF2B4Q9UI10 523 aaKnown RBP14.23□□□□□ -0.13
VARS-225ENST00000482996 VPS51Q9UID3 782 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 FZD4Q9ULV1 537 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 HS3ST2Q9Y278 367 aa14.23□□□□□ -0.13
VARS-225ENST00000482996 A0A0D9SEW6 157 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 A0A1W2PQJ5 194 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 LRRC72A6NJI9 287 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 ALOX15BO15296 676 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 BCAT2O15382 392 aaPredicted RBP14.22□□□□□ -0.13
VARS-225ENST00000482996 CCP110O43303 1012 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 FSBPO95073 299 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 TPM3P06753 285 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 PLEKP08567 350 aaPredicted RBP14.22□□□□□ -0.13
VARS-225ENST00000482996 GZMAP12544 262 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 VAV1P15498 845 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 RHOQP17081 205 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 GOT1P17174 413 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 ETFBP38117 255 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 CLCN6P51797 869 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 RPL7AP62424 266 aaKnown RBP14.22□□□□□ -0.13
VARS-225ENST00000482996 SCAPQ12770 1279 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 EFHC2Q5JST6 749 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 PPP1R15BQ5SWA1 713 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 MANEALQ5VSG8 457 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 RETSATQ6NUM9 610 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 SCYL2Q6P3W7 929 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 Q6ZVU0 165 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 ZNF571Q7Z3V5 609 aaPredicted RBP14.22□□□□□ -0.13
VARS-225ENST00000482996 DRC7Q8IY82 874 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 HDDC3Q8N4P3 179 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 CCDC185Q8N715 623 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 OR7D4Q8NG98 312 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 TBC1D31Q96DN5 1066 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 ZDHHC5Q9C0B5 715 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 ATP13A1Q9HD20 1204 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 FSCN3Q9NQT6 498 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 ADAMTS1Q9UHI8 967 aa14.22□□□□□ -0.13
VARS-225ENST00000482996 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.22□□□□□ -0.13
VARS-225ENST00000482996 KNL1Q8NG31 2342 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 ASCC3Q8N3C0 2202 aaKnown RBP14.21□□□□□ -0.13
VARS-225ENST00000482996 FAM47DPA6NHR8 397 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 C1QTNF3-AMACRE9PGA6 284 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 CBX4O00257 560 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 MCF2LO15068 1137 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 BNIP3LO60238 219 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 OPHN1O60890 802 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 RTN2O75298 545 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 LRIG2O94898 1065 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 FTLP02792 175 aaPredicted RBP14.21□□□□□ -0.13
VARS-225ENST00000482996 SRCP12931 536 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 RECQLP46063 649 aaPredicted RBP14.21□□□□□ -0.13
VARS-225ENST00000482996 MAPKAPK2P49137 400 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 AIF1P55008 147 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 GNA12Q03113 381 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 SLC20A2Q08357 652 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 TEAD4Q15561 434 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 TDRD12Q587J7 1177 aaKnown RBP14.21□□□□□ -0.13
VARS-225ENST00000482996 ARTNQ5T4W7 220 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 E4F1Q66K89 784 aaPredicted RBP14.21□□□□□ -0.13
VARS-225ENST00000482996 KIAA0895LQ68EN5 471 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 TMC6Q7Z403 805 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 VPS36Q86VN1 386 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 MINDY1Q8N5J2 469 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 OR2T34Q8NGX1 318 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 SYN2Q92777 582 aaPredicted RBP14.21□□□□□ -0.13
VARS-225ENST00000482996 TRIM11Q96F44 468 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 NEUROG2Q9H2A3 272 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 IFNKQ9P0W0 207 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 ZNF212Q9UDV6 495 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 SERGEFQ9UGK8 458 aa14.21□□□□□ -0.13
VARS-225ENST00000482996 BZW2Q9Y6E2 419 aaKnown RBP14.21□□□□□ -0.13
VARS-225ENST00000482996 DOCK4Q8N1I0 1966 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 FAM72CH0Y354 149 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 DDX3XO00571 662 aaKnown RBP eCLIP14.2□□□□□ -0.14
VARS-225ENST00000482996 KCNK5O95279 499 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 MT-CO1P00395 513 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 SKILP12757 684 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 CSRP1P21291 193 aaKnown RBP14.2□□□□□ -0.14
VARS-225ENST00000482996 PSMA2P25787 234 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 CD27P26842 260 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 L1CAMP32004 1257 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 PBX1P40424 430 aa14.2□□□□□ -0.14
VARS-225ENST00000482996 NOVA1P51513 510 aaKnown RBP14.2□□□□□ -0.14
VARS-225ENST00000482996 AFF3P51826 1226 aaKnown RBP14.2□□□□□ -0.14
VARS-225ENST00000482996 GALCP54803 685 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms