RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 FAM90A24PP0C7X0 464 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 CDC25AP30304 524 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 PAPOLAP51003 745 aaKnown RBP4.14□□□□□ -1.75
GTF3A-207ENST00000482655 ZNF84P51523 738 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 DMWDQ09019 674 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 DLGAP5Q15398 846 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 TAF5Q15542 800 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 SULT6B1Q6IMI4 303 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 LRIG3Q6UXM1 1119 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 RINLQ6ZS11 566 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 TRAPPC11Q7Z392 1133 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 RHPN2Q8IUC4 686 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 LAS2Q8IYD9 372 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 NRSN1Q8IZ57 195 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 FAM47BQ8NA70 645 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 SRFBP1Q8NEF9 429 aaKnown RBP4.14□□□□□ -1.75
GTF3A-207ENST00000482655 WDR60Q8WVS4 1066 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 ZFPM2Q8WW38 1151 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 USP13Q92995 863 aaPredicted RBP4.14□□□□□ -1.75
GTF3A-207ENST00000482655 FAR2Q96K12 515 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 ELOVL1Q9BW60 279 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 EPS8L2Q9H6S3 715 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 ITM2CQ9NQX7 267 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 MSRB1Q9NZV6 116 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 KIF17Q9P2E2 1029 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 ZNF69Q9UC07 566 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 PGAP2Q9UHJ9 254 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 PCDHB7Q9Y5E2 793 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 AFF2P51816 1311 aa4.14□□□□□ -1.75
GTF3A-207ENST00000482655 NHSL1Q5SYE7 1610 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 EEA1Q15075 1411 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 NKTRP30414 1462 aaKnown RBP4.13□□□□□ -1.75
GTF3A-207ENST00000482655 LRRC9Q6ZRR7 1453 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 PLEKHH2Q8IVE3 1493 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 PNMA6EA0A0J9YXQ4 647 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 IPO5O00410 1097 aaKnown RBP4.13□□□□□ -1.75
GTF3A-207ENST00000482655 ACTL6BO94805 426 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 NDUFB8O95169 186 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 SGPL1O95470 568 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 CBSLP0DN79 551 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 VEGFAP15692 232 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-207ENST00000482655 CCKARP32238 428 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 CBSP35520 551 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 HTR6P50406 440 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 AP2B1P63010 937 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 INPP5JQ15735 1006 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-207ENST00000482655 MIDNQ504T8 468 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 JAKMIP3Q5VZ66 844 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 RUSC1-AS1Q66K80 236 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 TANGO2Q6ICL3 276 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 JMJD6Q6NYC1 403 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-207ENST00000482655 ZNF549Q6P9A3 640 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 CYP26C1Q6V0L0 522 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 TMEM199Q8N511 208 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 ADPRHL1Q8NDY3 354 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 RSC1A1Q92681 617 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 LYZL4Q96KX0 146 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 MARK4Q96L34 752 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 GPR78Q96P69 363 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 RTKNQ9BST9 563 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 ABHD14AQ9BUJ0 271 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 GATA5Q9BWX5 397 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-207ENST00000482655 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 THSD1Q9NS62 852 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 CFDP1Q9UEE9 299 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-207ENST00000482655 DTNAQ9Y4J8 743 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 MYO5BQ9ULV0 1848 aa4.13□□□□□ -1.75
GTF3A-207ENST00000482655 ZFYVE9O95405 1425 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 PTPRUQ92729 1446 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 CCDC141Q6ZP82 1450 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 FYCO1Q9BQS8 1478 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 TRBV5-3A0A0A0MS03 114 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 TMEM272A0A1B0GTI8 110 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 EIF3FO00303 357 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-207ENST00000482655 NTSR2O95665 410 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 TBXAS1P24557 533 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-207ENST00000482655 CCKBRP32239 447 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 DDIT3P35638 169 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 KCNJ4P48050 445 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 THBS3P49746 956 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 TBX2Q13207 712 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-207ENST00000482655 IDI1Q13907 227 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 SEMA3AQ14563 771 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 FBXO47Q5MNV8 452 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 ZNF772Q68DY9 489 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-207ENST00000482655 ISM2Q6H9L7 571 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 KIAA1161Q6NSJ0 714 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 MSANTD2Q6P1R3 559 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 WDR93Q6P2C0 686 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 C16orf89Q6UX73 402 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 RAB11FIP2Q7L804 512 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 C2CD5Q86YS7 1000 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 ARL14EPQ8N8R7 260 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-207ENST00000482655 STT3BQ8TCJ2 826 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 OTUD7AQ8TE49 926 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-207ENST00000482655 CENPIQ92674 756 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-207ENST00000482655 UBXN10Q96LJ8 280 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 PYM1Q9BRP8 204 aaKnown RBP4.12□□□□□ -1.75
GTF3A-207ENST00000482655 BRD8Q9H0E9 1235 aa4.12□□□□□ -1.75
GTF3A-207ENST00000482655 TP63Q9H3D4 680 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms