RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SLC29A2Q14542 456 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 TMEM132DQ14C87 1099 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 MORF4L2Q15014 288 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 FAM110CQ1W6H9 321 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 WDR72Q3MJ13 1102 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 RHBDF2Q6PJF5 856 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 MTHFD1LQ6UB35 978 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 GSTA5Q7RTV2 222 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 DPP9Q86TI2 863 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 MAP7D3Q8IWC1 876 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 OR2C3Q8N628 320 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 DNAJB8Q8NHS0 232 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 FRS2Q8WU20 508 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 DIO2Q92813 273 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 NKD2Q969F2 451 aaPredicted RBP7.99□□□□□ -1.13
SNX13-208ENST00000482558 TMEM176AQ96HP8 235 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 CCDC114Q96M63 670 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 RIPOR3Q96MK2 946 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 CFAP57Q96MR6 1250 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 SLITRK1Q96PX8 696 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 NUDT16L1Q9BRJ7 211 aaKnown RBP7.99□□□□□ -1.13
SNX13-208ENST00000482558 SYT17Q9BSW7 474 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 GCOM2Q9BZD3 368 aaPredicted RBP7.99□□□□□ -1.13
SNX13-208ENST00000482558 NSRP1Q9H0G5 558 aaKnown RBP7.99□□□□□ -1.13
SNX13-208ENST00000482558 PLEKHA4Q9H4M7 779 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 CCDC134Q9H6E4 229 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 SYNCQ9H7C4 482 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 ASNSD1Q9NWL6 643 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 RSPH14Q9UHP6 348 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 SLC12A6Q9UHW9 1150 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 BARX2Q9UMQ3 279 aaPredicted RBP7.99□□□□□ -1.13
SNX13-208ENST00000482558 CRYL1Q9Y2S2 319 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 RRP15Q9Y3B9 282 aaKnown RBP7.99□□□□□ -1.13
SNX13-208ENST00000482558 PCDHGB6Q9Y5F9 930 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 PCDHGA9Q9Y5G4 932 aaKnown RBP7.99□□□□□ -1.13
SNX13-208ENST00000482558 PCDHGA8Q9Y5G5 932 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 PCDHGA7Q9Y5G6 932 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 PCDHGA6Q9Y5G7 932 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 PCDHGA3Q9Y5H0 932 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 PCDHGA2Q9Y5H1 932 aa7.99□□□□□ -1.13
SNX13-208ENST00000482558 ZNFX1Q9P2E3 1918 aaKnown RBP7.99□□□□□ -1.13
SNX13-208ENST00000482558 A0A087WUV0 522 aaPredicted RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 CCL15-CCL14A0A0B4J2E2 113 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 LACTBL1A8MY62 500 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 FAM155AB1AL88 458 aaPredicted RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 ZNF487B1APH4 448 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 B8ZZF3 427 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 FAM227AF5H4B4 570 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 TULP2O00295 520 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNX13-208ENST00000482558 TRAPPC3O43617 180 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 LIASO43766 372 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 DLX3O60479 287 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 KRT1P04264 644 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 ERBB2P04626 1255 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 EDN1P05305 212 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 KRT19P08727 400 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 CD19P15391 556 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 CD58P19256 250 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 PSMA2P25787 234 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 HPDP32754 393 aaPredicted RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 PNPLA4P41247 253 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 CLCN3P51790 818 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 VCPP55072 806 aaKnown RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 CORO7P57737 925 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 MAGOHP61326 146 aaKnown RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 PSMC1P62191 440 aaKnown RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 RNF4P78317 190 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 PDCLQ13371 301 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 TFDP2Q14188 446 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 RASA2Q15283 850 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 LLGL1Q15334 1064 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 CCL15Q16663 113 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 TNFAIP8L3Q5GJ75 292 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 FAM47CQ5HY64 1035 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 LCLAT1Q6UWP7 414 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 C4orf22Q6V702 233 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 TTLL10Q6ZVT0 673 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 PLEKHH3Q7Z736 793 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 NLRP14Q86W24 1093 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 UNC93AQ86WB7 457 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 PTRH1Q86Y79 214 aaKnown RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 COLGALT2Q8IYK4 626 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 ZDHHC14Q8IZN3 488 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 ZCCHC9Q8N567 271 aaKnown RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 SH2D3CQ8N5H7 860 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 LRRC52Q8N7C0 313 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 C2orf69Q8N8R5 385 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 CLRN3Q8NCR9 226 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 PPP1R13LQ8WUF5 828 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 C1orf54Q8WWF1 131 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 USP6NLQ92738 828 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 MCRS1Q96EZ8 462 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 LIN37Q96GY3 246 aaPredicted RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 HPDLQ96IR7 371 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 UBXN10Q96LJ8 280 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 MCEEQ96PE7 176 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 C16orf70Q9BSU1 422 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 FRMD8Q9BZ67 464 aaPredicted RBP7.98□□□□□ -1.13
SNX13-208ENST00000482558 MKRN2Q9H000 416 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms