RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 MIS12Q9H081 205 aa17.85■□□□□ 0.45
RXRB-203ENST00000481441 A0A1W2PQU0 124 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 C1QTNF3-AMACRE9PGA6 284 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 M0QYV0 167 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 SCAMP1O15126 338 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 F13A1P00488 732 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 APOEP02649 317 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 ZSCAN22P10073 491 aaPredicted RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 EPB41P11171 864 aaKnown RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 DUSP3P51452 185 aaPredicted RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 DPYDQ12882 1025 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 ZNF284Q2VY69 593 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 ZC3H12AQ5D1E8 599 aaKnown RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 CXorf57Q6NSI4 855 aaKnown RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 NEK5Q6P3R8 708 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 CIR1Q86X95 450 aaPredicted RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 CCAR2Q8N163 923 aaKnown RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 SLC22A18ASQ8N1D0 253 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 IFI44Q8TCB0 444 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 ERCC4Q92889 916 aaPredicted RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 ALG14Q96F25 216 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 IFT43Q96FT9 208 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 PRR11Q96HE9 360 aaPredicted RBP17.84■□□□□ 0.45
RXRB-203ENST00000481441 BTN2A3PQ96KV6 586 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 NOX5Q96PH1 765 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 CALN1Q9BXU9 219 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 FZD3Q9NPG1 666 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 RP1P56715 2156 aa17.84■□□□□ 0.45
RXRB-203ENST00000481441 NEMP2A6NFY4 417 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 K7ESM1 405 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 RNF225M0QZC1 329 aaPredicted RBP17.83■□□□□ 0.44
RXRB-203ENST00000481441 TGM2P21980 687 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 CMA1P23946 247 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 TBXAS1P24557 533 aaPredicted RBP17.83■□□□□ 0.44
RXRB-203ENST00000481441 RBMS1P29558 406 aaKnown RBP17.83■□□□□ 0.44
RXRB-203ENST00000481441 RPL34P49207 117 aaKnown RBP17.83■□□□□ 0.44
RXRB-203ENST00000481441 CSRP3P50461 194 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 NUCB2P80303 420 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 LRMPQ12912 555 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 DLG2Q15700 870 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 ACCSLQ4AC99 568 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 TCERG1LQ5VWI1 586 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 GCNT7Q6ZNI0 430 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 Q6ZVU0 165 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 BEND5Q7L4P6 421 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 HORMAD1Q86X24 394 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 CCDC97Q96F63 343 aaPredicted RBP17.83■□□□□ 0.44
RXRB-203ENST00000481441 ATXN7L3BQ96GX2 97 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 PRMT1Q99873 361 aaKnown RBP17.83■□□□□ 0.44
RXRB-203ENST00000481441 DUSP23Q9BVJ7 150 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 TRPM6Q9BX84 2022 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 EVA1BQ9NVM1 165 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 CFAP45Q9UL16 551 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 PCDHGA8Q9Y5G5 932 aa17.83■□□□□ 0.44
RXRB-203ENST00000481441 TCAF2A6NFQ2 919 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 CDRT15L2A8MXV6 281 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 F5H5T6 163 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 CETN3O15182 167 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 NEBLO76041 1014 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 CALCAP01258 141 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 IGLV3-25P01717 112 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 BRD2P25440 801 aaKnown RBP17.82■□□□□ 0.44
RXRB-203ENST00000481441 DNM1Q05193 864 aaKnown RBP17.82■□□□□ 0.44
RXRB-203ENST00000481441 STILQ15468 1287 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 DCAF17Q5H9S7 520 aaPredicted RBP17.82■□□□□ 0.44
RXRB-203ENST00000481441 PRICKLE2Q7Z3G6 844 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 ABI3BPQ7Z7G0 1075 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 FAM149B1Q96BN6 582 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 GRAMD1AQ96CP6 724 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 SLC25A13Q9UJS0 675 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 ENTPD2Q9Y5L3 495 aa17.82■□□□□ 0.44
RXRB-203ENST00000481441 PMS2P1A4D2B8 440 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 KCNU1A8MYU2 1149 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 SART1O43290 800 aaKnown RBP17.81■□□□□ 0.44
RXRB-203ENST00000481441 CTSLP07711 333 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 ZNF18P17022 549 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 HNRNPA2B1P22626 353 aaKnown RBP17.81■□□□□ 0.44
RXRB-203ENST00000481441 AKT2P31751 481 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 OXCT1P55809 520 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 CLDN2P57739 230 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 EIF4EBP2Q13542 120 aaPredicted RBP17.81■□□□□ 0.44
RXRB-203ENST00000481441 ZNF542PQ5EBM4 170 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 CCDC81Q6ZN84 652 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 OR52K2Q8NGK3 314 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 FEM1AQ9BSK4 669 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 GPR27Q9NS67 375 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 DNAJC28Q9NX36 388 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 ZFR2Q9UPR6 939 aaKnown RBP17.81■□□□□ 0.44
RXRB-203ENST00000481441 PCDHB4Q9Y5E5 795 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 OR51B4Q9Y5P0 310 aa17.81■□□□□ 0.44
RXRB-203ENST00000481441 TRUB2O95900 331 aaKnown RBP17.8■□□□□ 0.44
RXRB-203ENST00000481441 HNRNPKP61978 463 aaKnown RBP eCLIP17.8■□□□□ 0.44
RXRB-203ENST00000481441 PITX1P78337 314 aaPredicted RBP17.8■□□□□ 0.44
RXRB-203ENST00000481441 SRSF1Q07955 248 aaKnown RBP eCLIP17.8■□□□□ 0.445e-13■■■□□ 15
RXRB-203ENST00000481441 CLN3Q13286 438 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 CDKN3Q16667 212 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 ARL13BQ3SXY8 428 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 TTC39BQ5VTQ0 682 aaPredicted RBP17.8■□□□□ 0.44
RXRB-203ENST00000481441 ZCCHC8Q6NZY4 707 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms