RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 RNFT2Q96EX2 444 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 PPM1MQ96MI6 270 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 IFT27Q9BW83 186 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 NPLQ9BXD5 320 aaPredicted RBP4.16□□□□□ -1.74
CBX3-207ENST00000481300 QTRT1Q9BXR0 403 aaKnown RBP4.16□□□□□ -1.74
CBX3-207ENST00000481300 TAOK3Q9H2K8 898 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 MROH8Q9H579 483 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 TLR8Q9NR97 1041 aaKnown RBP4.16□□□□□ -1.74
CBX3-207ENST00000481300 TMEM248Q9NWD8 314 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 CD207Q9UJ71 328 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 TBX20Q9UMR3 447 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 DHDHQ9UQ10 334 aa4.16□□□□□ -1.74
CBX3-207ENST00000481300 SETD1BQ9UPS6 1966 aaKnown RBP4.16□□□□□ -1.74
CBX3-207ENST00000481300 ZNF335Q9H4Z2 1342 aaPredicted RBP4.16□□□□□ -1.74
CBX3-207ENST00000481300 CYP2D7A0A087X1C5 515 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 WDR91A4D1P6 747 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 SH2D7A6NKC9 451 aaPredicted RBP4.15□□□□□ -1.75
CBX3-207ENST00000481300 A6NLC8 198 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.75
CBX3-207ENST00000481300 KCNU1A8MYU2 1149 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 WDHD1O75717 1129 aaPredicted RBP4.15□□□□□ -1.75
CBX3-207ENST00000481300 CD53P19397 219 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 SKIV2L2P42285 1042 aaKnown RBP4.15□□□□□ -1.75
CBX3-207ENST00000481300 RHAGQ02094 409 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 ID2Q02363 134 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 CFHR1Q03591 330 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 G3BP1Q13283 466 aaKnown RBP eCLIP4.15□□□□□ -1.75
CBX3-207ENST00000481300 IL13RA2Q14627 380 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 NAA25Q14CX7 972 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 PGM5Q15124 567 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 GPR68Q15743 365 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 SRSF7Q16629 238 aaKnown RBP eCLIP4.15□□□□□ -1.75
CBX3-207ENST00000481300 SLC4A8Q2Y0W8 1093 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 C5orf22Q49AR2 442 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 KIAA1755Q5JYT7 1200 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 AADACL2Q6P093 401 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 ZNF793Q6ZN11 406 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 UBE2Q1Q7Z7E8 422 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 NEK8Q86SG6 692 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 IGFN1Q86VF2 1251 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 TCP11L2Q8N4U5 519 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 PRSS3P2Q8NHM4 247 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 TUBB6Q9BUF5 446 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 SLC26A6Q9BXS9 759 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.15□□□□□ -1.75
CBX3-207ENST00000481300 TTC12Q9H892 705 aaPredicted RBP4.15□□□□□ -1.75
CBX3-207ENST00000481300 UBN1Q9NPG3 1134 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 PAPOLBQ9NRJ5 636 aaKnown RBP4.15□□□□□ -1.75
CBX3-207ENST00000481300 TMEM45AQ9NWC5 275 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 UPB1Q9UBR1 384 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 ZNF70Q9UC06 446 aaPredicted RBP4.15□□□□□ -1.75
CBX3-207ENST00000481300 HSF4Q9ULV5 492 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 ARHGAP26Q9UNA1 814 aa4.15□□□□□ -1.75
CBX3-207ENST00000481300 RHODO00212 210 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 PRPF4O43172 522 aaKnown RBP eCLIP4.14□□□□□ -1.75
CBX3-207ENST00000481300 TULP3O75386 442 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 BCAR3O75815 825 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 CBX6O95503 412 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 FCGR2AP12318 317 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 KELP23276 732 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 KRT9P35527 623 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 HNF1BP35680 557 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 GJC1P36383 396 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 GPD2P43304 727 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 RPP30P78346 268 aaKnown RBP4.14□□□□□ -1.75
CBX3-207ENST00000481300 ZBTB16Q05516 673 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 DAZAP2Q15038 168 aaPredicted RBP4.14□□□□□ -1.75
CBX3-207ENST00000481300 EZH2Q15910 746 aaKnown RBP4.14□□□□□ -1.75
CBX3-207ENST00000481300 SUPT20HL1Q3ZLR7 823 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 ALG10Q5BKT4 473 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 ALG10BQ5I7T1 473 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 SH2D4BQ5SQS7 431 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 TMEM268Q5VZI3 342 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 ISM2Q6H9L7 571 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 ADGRG6Q86SQ4 1221 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 CCDC25Q86WR0 208 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 GHDCQ8N2G8 530 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 SCAIQ8N9R8 606 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 RFWD2Q8NHY2 731 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 CLMNQ96JQ2 1002 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 SIGLEC11Q96RL6 698 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 PRSS22Q9GZN4 317 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 JMJD4Q9H9V9 463 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 Q9N2J8 555 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 ZNF69Q9UC07 566 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 UTS2RQ9UKP6 389 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 LAMP3Q9UQV4 416 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 TMEM98Q9Y2Y6 226 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 ABCC8Q09428 1581 aa4.14□□□□□ -1.75
CBX3-207ENST00000481300 CEP164Q9UPV0 1460 aa4.13□□□□□ -1.75
CBX3-207ENST00000481300 J3KRW8 73 aa4.13□□□□□ -1.75
CBX3-207ENST00000481300 TP73O15350 636 aa4.13□□□□□ -1.75
CBX3-207ENST00000481300 EPB41L2O43491 1005 aaKnown RBP4.13□□□□□ -1.75
CBX3-207ENST00000481300 LCKP06239 509 aa4.13□□□□□ -1.75
CBX3-207ENST00000481300 PRR35P0CG20 571 aa4.13□□□□□ -1.75
CBX3-207ENST00000481300 CTSAP10619 480 aa4.13□□□□□ -1.75
CBX3-207ENST00000481300 ITGB6P18564 788 aa4.13□□□□□ -1.75
CBX3-207ENST00000481300 KLRC2P26717 231 aa4.13□□□□□ -1.75
CBX3-207ENST00000481300 ELF1P32519 619 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms