RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 ABCC13Q9NSE7 274 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 IGSF9Q9P2J2 1179 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 NUP205Q92621 2012 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 CXorf49A8MYA2 514 aaPredicted RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 ENPP3O14638 875 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 MAGEB3O15480 346 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 LYNP07948 512 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 MAP7Q14244 749 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 SLC1A5Q15758 541 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 PLEKHG4Q58EX7 1191 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 PDZD4Q76G19 769 aaPredicted RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 DBF4BQ8NFT6 615 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 TET1Q8NFU7 2136 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 CENPKQ9BS16 269 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 OSBPL2Q9H1P3 480 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 ELAC1Q9H777 363 aaKnown RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 NMUR1Q9HB89 426 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 KCNK1O00180 336 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 TRDMT1O14717 391 aaKnown RBP17.15■□□□□ 0.34
SH3D21-203ENST00000480549 FKTNO75072 461 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 APOEP02649 317 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 MLNP12872 115 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 TAC1P20366 129 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 CA4P22748 312 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 PTPN3P26045 913 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 APLP1P51693 650 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 TCTN1Q2MV58 587 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 WASHC2DQ5SRD0 308 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 ARTNQ5T4W7 220 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 SPATA24Q86W54 205 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 TUBGCP5Q96RT8 1024 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 HAPLN3Q96S86 360 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■■□□ 15.2
SH3D21-203ENST00000480549 SMOC2Q9H3U7 446 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 ABI2Q9NYB9 513 aaPredicted RBP17.15■□□□□ 0.34
SH3D21-203ENST00000480549 SH3GLB1Q9Y371 365 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 SCN5AQ14524 2016 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 VEGFBP49765 207 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 IL9RQ01113 521 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 FAAP100Q0VG06 881 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 GALNT2Q10471 571 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 VARS2Q5ST30 1063 aaKnown RBP17.15■□□□□ 0.34
SH3D21-203ENST00000480549 LRRC8BQ6P9F7 803 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 RFWD3Q6PCD5 774 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 STKLD1Q8NE28 680 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 CASP10Q92851 521 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 HDAC11Q96DB2 347 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 FAM193BQ96PV7 902 aaPredicted RBP17.15■□□□□ 0.34
SH3D21-203ENST00000480549 FERMT1Q9BQL6 677 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 PRKAG3Q9UGI9 489 aa17.15■□□□□ 0.34
SH3D21-203ENST00000480549 NCAM2O15394 837 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 GATMP50440 423 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 BTBD8Q5XKL5 378 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SH2D5Q6ZV89 423 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 ZNF554Q86TJ5 538 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SCN4BQ8IWT1 228 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 DCP1BQ8IZD4 617 aaKnown RBP17.14■□□□□ 0.33
SH3D21-203ENST00000480549 BANPQ8N9N5 519 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 PPFIBP2Q8ND30 876 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 LZICQ8WZA0 190 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 DPF3Q92784 378 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 CASD1Q96PB1 797 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 PCDHA11Q9Y5I1 949 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 TANC1Q9C0D5 1861 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 IQANK1A0A1B0GTG1 560 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 TRIM43BA6NCK2 446 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SYN3O14994 580 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 TADA2AO75478 443 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 FAM155BO75949 473 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 KRT36O76013 467 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 INHBAP08476 426 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 GPR15P49685 360 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SLC44A4Q53GD3 710 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 TRMT10BQ6PF06 316 aaKnown RBP17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SLC26A11Q86WA9 606 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 GSDMBQ8TAX9 411 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 RNF34Q969K3 372 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 FUBP3Q96I24 572 aaKnown RBP eCLIP17.14■□□□□ 0.33
SH3D21-203ENST00000480549 OSER1Q9NX31 292 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SFMBT1Q9UHJ3 866 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 MAD1L1Q9Y6D9 718 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 MRPL58Q14197 206 aaKnown RBP17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SPARCL1Q14515 664 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 CGB2Q6NT52 195 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 LRRC74BQ6ZQY2 392 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 CCDC80Q76M96 950 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SCUBE1Q8IWY4 988 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SH3TC2Q8TF17 1288 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 SERAC1Q96JX3 654 aa17.14■□□□□ 0.33
SH3D21-203ENST00000480549 OXCT2Q9BYC2 517 aaPredicted RBP17.14■□□□□ 0.33
SH3D21-203ENST00000480549 MSI1O43347 362 aaKnown RBP17.13■□□□□ 0.33
SH3D21-203ENST00000480549 CBX6O95503 412 aa17.13■□□□□ 0.33
SH3D21-203ENST00000480549 CYP2C18P33260 490 aa17.13■□□□□ 0.33
SH3D21-203ENST00000480549 GARSP41250 739 aaKnown RBP17.13■□□□□ 0.33
SH3D21-203ENST00000480549 NEK3P51956 506 aa17.13■□□□□ 0.33
SH3D21-203ENST00000480549 PRMT2P55345 433 aa17.13■□□□□ 0.33
SH3D21-203ENST00000480549 BFSP2Q13515 415 aa17.13■□□□□ 0.33
SH3D21-203ENST00000480549 CFAP157Q5JU67 520 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms