RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SPOPLQ6IQ16 392 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 PTAR1Q7Z6K3 402 aaPredicted RBP11.51□□□□□ -0.57
CCDC18-208ENST00000479653 B3GNT8Q7Z7M8 397 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 JPH3Q8WXH2 748 aaPredicted RBP11.51□□□□□ -0.57
CCDC18-208ENST00000479653 PPP1R13BQ96KQ4 1090 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 SPAG5Q96R06 1193 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 PREBQ9HCU5 417 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 IPO11Q9UI26 975 aaKnown RBP11.51□□□□□ -0.57
CCDC18-208ENST00000479653 ACSL6Q9UKU0 697 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 SARDHQ9UL12 918 aa11.51□□□□□ -0.57
CCDC18-208ENST00000479653 POLQO75417 2590 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 PRAMEF33A0A0G2JMD5 474 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 TMX2-CTNND1H3BSU7 103 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 RIOK3O14730 519 aaKnown RBP11.5□□□□□ -0.57
CCDC18-208ENST00000479653 IRAK2O43187 625 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 MTSS1O43312 755 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 EXOC3O60645 756 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 PRAMEF10O60809 474 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 YEATS4O95619 227 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 C4BPAP04003 597 aaKnown RBP11.5□□□□□ -0.57
CCDC18-208ENST00000479653 CSF2P04141 144 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 HNRNPA2B1P22626 353 aaKnown RBP11.5□□□□□ -0.57
CCDC18-208ENST00000479653 SLC6A4P31645 630 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 ASPAP45381 313 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 AP3M2P53677 418 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 ACCSLQ4AC99 568 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 ZNF394Q53GI3 561 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 PIGZQ86VD9 579 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 DCP2Q8IU60 420 aaKnown RBP11.5□□□□□ -0.57
CCDC18-208ENST00000479653 NELFCDQ8IXH7 590 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 APCDD1Q8J025 514 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 CFAP52Q8N1V2 620 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 HJURPQ8NCD3 748 aaPredicted RBP11.5□□□□□ -0.57
CCDC18-208ENST00000479653 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 NAT6Q93015 286 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 FAM131CQ96AQ9 280 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 MIB2Q96AX9 1013 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 SPATA32Q96LK8 384 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 HEXIM2Q96MH2 286 aaKnown RBP11.5□□□□□ -0.57
CCDC18-208ENST00000479653 DNAI2Q9GZS0 605 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 CSNK1G3Q9Y6M4 447 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 ITIH6Q6UXX5 1313 aa11.5□□□□□ -0.57
CCDC18-208ENST00000479653 CELSR2Q9HCU4 2923 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 LRRIQ3A6PVS8 624 aaPredicted RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 C1QTNF3-AMACRE9PGA6 284 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 BNIP3LO60238 219 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 ACSL4O60488 711 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 RPN1P04843 607 aaKnown RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 JUNDP17535 347 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 ITIH1P19827 911 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 ELAVL4P26378 380 aaKnown RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 TXLNAP40222 546 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 STAT6P42226 847 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 MAPK10P53779 464 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 SLC8A3P57103 927 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 TAS2R38P59533 333 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 RPS24P62847 133 aaKnown RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 FZD2Q14332 565 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 ZNF284Q2VY69 593 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 FOXD4L6Q3SYB3 417 aaPredicted RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 FAM133BQ5BKY9 247 aaKnown RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 FHL5Q5TD97 284 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 BSPRYQ5W0U4 402 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 FOXD4L3Q6VB84 417 aaPredicted RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 GCNT7Q6ZNI0 430 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 HORMAD1Q86X24 394 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 UNC45BQ8IWX7 931 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 C9orf43Q8TAL5 461 aaPredicted RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 ZNF507Q8TCN5 953 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 PLEKHO2Q8TD55 490 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 TAF4BQ92750 862 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 GFM1Q96RP9 751 aaKnown RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 ULBP1Q9BZM6 244 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 GULP1Q9UBP9 304 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 TUBD1Q9UJT1 453 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 PADI4Q9UM07 663 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 LOXL2Q9Y4K0 774 aa11.49□□□□□ -0.57
CCDC18-208ENST00000479653 MORC2Q9Y6X9 1032 aaPredicted RBP11.49□□□□□ -0.57
CCDC18-208ENST00000479653 CSMD1Q96PZ7 3565 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 GOLGA6L4A6NEF3 574 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 A6NNZ2 444 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 TPP1O14773 563 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 PCDH8O95206 1070 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 KRT7P08729 469 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 NME1P15531 152 aaKnown RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 COL8A1P27658 744 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 NOS2P35228 1153 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 NASPP49321 788 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 ADKP55263 362 aaKnown RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 C1orf61Q13536 156 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 STK38Q15208 465 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 SKOR2Q2VWA4 1001 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 RAB41Q5JT25 222 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 PM20D1Q6GTS8 502 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 NEK5Q6P3R8 708 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 CCDC73Q6ZRK6 1079 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 ABI3BPQ7Z7G0 1075 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 PARGQ86W56 976 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms