RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 MXI1P50539 228 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 SRSF6Q13247 344 aaKnown RBP17.84■□□□□ 0.45
HMGN1-212ENST00000479586 DRAP1Q14919 205 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-212ENST00000479586 ZNF284Q2VY69 593 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 PIP5KL1Q5T9C9 394 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 PMF1Q6P1K2 205 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 ZNF574Q6ZN55 896 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-212ENST00000479586 Q6ZVU0 165 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 CIR1Q86X95 450 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-212ENST00000479586 ARL14Q8N4G2 192 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 FBXL13Q8NEE6 735 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 ZNF548Q8NEK5 533 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-212ENST00000479586 GRAMD1AQ96CP6 724 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 SLC39A13Q96H72 371 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.84■□□□□ 0.45
HMGN1-212ENST00000479586 ANKMY1Q9P2S6 941 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 SERTAD1Q9UHV2 236 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 ATXN7L1Q9ULK2 861 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-212ENST00000479586 TLR6Q9Y2C9 796 aa17.84■□□□□ 0.45
HMGN1-212ENST00000479586 FAM87AP0C7U9 286 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 HNRNPA2B1P22626 353 aaKnown RBP17.83■□□□□ 0.44
HMGN1-212ENST00000479586 GTF2H1P32780 548 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 PDX1P52945 283 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 HNRNPKP61978 463 aaKnown RBP eCLIP17.83■□□□□ 0.44
HMGN1-212ENST00000479586 ENPEPQ07075 957 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 ACCSLQ4AC99 568 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 OR6B2Q6IFH4 312 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 ZCCHC8Q6NZY4 707 aaKnown RBP17.83■□□□□ 0.44
HMGN1-212ENST00000479586 ABI3BPQ7Z7G0 1075 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 CHSY1Q86X52 802 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 CEP57L1Q8IYX8 460 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 WDR36Q8NI36 951 aaKnown RBP17.83■□□□□ 0.44
HMGN1-212ENST00000479586 IFT43Q96FT9 208 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 PAGE5Q96GU1 130 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 SERPINB11Q96P15 392 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 ARHGAP9Q9BRR9 750 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 NBPF19A0A087WUL8 3843 aa17.83■□□□□ 0.44
HMGN1-212ENST00000479586 MCF2LO15068 1137 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 BNIP3LO60238 219 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 VDRP11473 427 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 TACR2P21452 398 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 PSMC2P35998 433 aaKnown RBP17.82■□□□□ 0.44
HMGN1-212ENST00000479586 SULT2A1Q06520 285 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 NFIL3Q16649 462 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 PERM1Q5SV97 790 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 Q6ZSR6 202 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 USP53Q70EK8 1073 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 PTAR1Q7Z6K3 402 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-212ENST00000479586 TAC4Q86UU9 113 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 HORMAD1Q86X24 394 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 SLC35F5Q8WV83 523 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 TFAP2BQ92481 460 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 ZNF396Q96N95 335 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-212ENST00000479586 MIS12Q9H081 205 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 ZFR2Q9UPR6 939 aaKnown RBP17.82■□□□□ 0.44
HMGN1-212ENST00000479586 NAALADL1Q9UQQ1 740 aa17.82■□□□□ 0.44
HMGN1-212ENST00000479586 SPTAN1Q13813 2472 aaKnown RBP17.82■□□□□ 0.44
HMGN1-212ENST00000479586 EME2A4GXA9 379 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-212ENST00000479586 ALOX15BO15296 676 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 ACTN4O43707 911 aaKnown RBP17.81■□□□□ 0.44
HMGN1-212ENST00000479586 ATP9BO43861 1147 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 CTSLP07711 333 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 ITGA2BP08514 1039 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 ZNF18P17022 549 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 MLLT3P42568 568 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-212ENST00000479586 PLK1P53350 603 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 NNTQ13423 1086 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 CUL2Q13617 745 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 SLC12A1Q13621 1099 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 FZD2Q14332 565 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 TGIF1Q15583 401 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 DLG2Q15700 870 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 DEFB133Q30KQ1 61 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 RESP18Q5W5W9 173 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 SEL1L3Q68CR1 1132 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 CXorf57Q6NSI4 855 aaKnown RBP17.81■□□□□ 0.44
HMGN1-212ENST00000479586 LCLAT1Q6UWP7 414 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 CCAR2Q8N163 923 aaKnown RBP17.81■□□□□ 0.44
HMGN1-212ENST00000479586 ERCC4Q92889 916 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-212ENST00000479586 SGF29Q96ES7 293 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 MAPK8IP1Q9UQF2 711 aa17.81■□□□□ 0.44
HMGN1-212ENST00000479586 MYO9AB2RTY4 2548 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 USP9YO00507 2555 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-212ENST00000479586 CCDC187A0A096LP49 1063 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 A6NNZ2 444 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 TCEA3O75764 348 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 AFPP02771 609 aaKnown RBP17.8■□□□□ 0.44
HMGN1-212ENST00000479586 NUCB2P80303 420 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 ADAM9Q13443 819 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 ZC3H12AQ5D1E8 599 aaKnown RBP17.8■□□□□ 0.44
HMGN1-212ENST00000479586 NEK5Q6P3R8 708 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 XKR5Q6UX68 686 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 ALG14Q96F25 216 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 BMFQ96LC9 184 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 ZSWIM1Q9BR11 485 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 GPR27Q9NS67 375 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 KLF15Q9UIH9 416 aa17.8■□□□□ 0.44
HMGN1-212ENST00000479586 SLC25A13Q9UJS0 675 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms