RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 PER2O15055 1255 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 CCNT1O60563 726 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 SGPL1O95470 568 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 ALDOCP09972 364 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 HKR1P10072 659 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 APEHP13798 732 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 PKMP14618 531 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 RRM1P23921 792 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 HOXD12P35452 270 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 ARL1P40616 181 aaPredicted RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 RGS19P49795 217 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 RARSP54136 660 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 FOXI1Q12951 378 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 CUL4AQ13619 759 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 AP5B1Q2VPB7 878 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 GXYLT1Q4G148 440 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 AARS2Q5JTZ9 985 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 PCID2Q5JVF3 399 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 CFAP58Q5T655 872 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 KLHL24Q6TFL4 600 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 GALNT7Q86SF2 657 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 PEG10Q86TG7 708 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 BRSK2Q8IWQ3 736 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 CNTROBQ8N137 903 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 SLC44A3Q8N4M1 653 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 FAM98AQ8NCA5 519 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 MAFAQ8NHW3 353 aaPredicted RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 NOC3LQ8WTT2 800 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 NCSTNQ92542 709 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 CNOT9Q92600 299 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 USP6NLQ92738 828 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 NSUN4Q96CB9 384 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 GPR78Q96P69 363 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 NPLQ9BXD5 320 aaPredicted RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 CIPCQ9C0C6 399 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 EPHX3Q9H6B9 360 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 TTC12Q9H892 705 aaPredicted RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 PCDHB16Q9NRJ7 776 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 SEPT11Q9NVA2 429 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 NKIRAS2Q9NYR9 191 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 SLC25A13Q9UJS0 675 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 MAST3O60307 1309 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 SPATA31A1Q5TZJ5 1347 aa3.91□□□□□ -1.78
NF1-209ENST00000479536 RUSC2Q8N2Y8 1516 aa3.9□□□□□ -1.78
NF1-209ENST00000479536 LINC00473A8K010 186 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 C17orf100A8MU93 164 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 CLIC1O00299 241 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 DSCR3O14972 297 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 TGFB1I1O43294 461 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 PLOD3O60568 738 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 CCNDBP1O95273 360 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 SPARCP09486 303 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 COX7A2P14406 83 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 HOXB9P17482 250 aaPredicted RBP3.9□□□□□ -1.79
NF1-209ENST00000479536 ABCD1P33897 745 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 ACTN2P35609 894 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 KRT20P35900 424 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 GRIA3P42263 894 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 ABCG1P45844 678 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 MTNR1AP48039 350 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 VPS41P49754 854 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 CCT8P50990 548 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 FOXF2Q12947 444 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 IL13RA2Q14627 380 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 MFSD13AQ14CX5 517 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 SLC9B1Q4ZJI4 515 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 RILPL1Q5EBL4 403 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 NAPEPLDQ6IQ20 393 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 GJB7Q6PEY0 223 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 RNF144BQ7Z419 303 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 BCDIN3DQ7Z5W3 292 aaKnown RBP3.9□□□□□ -1.79
NF1-209ENST00000479536 TMEM200AQ86VY9 491 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 RPAP2Q8IXW5 612 aaPredicted RBP3.9□□□□□ -1.79
NF1-209ENST00000479536 LSMEM1Q8N8F7 131 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 C2CD4CQ8TF44 421 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 RAB40AQ8WXH6 277 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 LINC00476Q8WZB0 136 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 ATP2A3Q93084 1043 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 SAAL1Q96ER3 474 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 ZNF845Q96IR2 970 aaPredicted RBP3.9□□□□□ -1.79
NF1-209ENST00000479536 COQ10AQ96MF6 247 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 HS6ST2Q96MM7 605 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 MUC13Q9H3R2 512 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 SYNCQ9H7C4 482 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 ASNSD1Q9NWL6 643 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 GAR1Q9NY12 217 aaKnown RBP3.9□□□□□ -1.79
NF1-209ENST00000479536 TFCP2L1Q9NZI6 479 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 MPP6Q9NZW5 540 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 HDAC6Q9UBN7 1215 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 ADD3Q9UEY8 706 aaKnown RBP3.9□□□□□ -1.79
NF1-209ENST00000479536 PKP3Q9Y446 797 aa3.9□□□□□ -1.79
NF1-209ENST00000479536 FNDC1Q4ZHG4 1894 aaPredicted RBP3.9□□□□□ -1.79
NF1-209ENST00000479536 TEX13CA0A0J9YWL9 993 aa3.89□□□□□ -1.79
NF1-209ENST00000479536 A0A1W2PQM1 296 aa3.89□□□□□ -1.79
NF1-209ENST00000479536 CCDC151A5D8V7 595 aa3.89□□□□□ -1.79
NF1-209ENST00000479536 DNAJC9-AS1A6NH13 148 aa3.89□□□□□ -1.79
NF1-209ENST00000479536 B4DLN1 442 aa3.89□□□□□ -1.79
NF1-209ENST00000479536 ORC4O43929 436 aa3.89□□□□□ -1.79
NF1-209ENST00000479536 EXOC3O60645 756 aa3.89□□□□□ -1.79
NF1-209ENST00000479536 CNTN5O94779 1100 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms