RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 LIN7CQ9NUP9 197 aaKnown RBP4.97□□□□□ -1.61
SSR1-207ENST00000479485 SPATS2LQ9NUQ6 558 aaKnown RBP4.97□□□□□ -1.61
SSR1-207ENST00000479485 KLHL13Q9P2N7 655 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 SLC12A4Q9UP95 1085 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.97□□□□□ -1.61
SSR1-207ENST00000479485 HEMK1Q9Y5R4 338 aaPredicted RBP4.97□□□□□ -1.61
SSR1-207ENST00000479485 SIRT4Q9Y6E7 314 aaPredicted RBP4.97□□□□□ -1.61
SSR1-207ENST00000479485 UNC13AQ9UPW8 1703 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 TRPM1Q7Z4N2 1603 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 KIAA0586Q9BVV6 1533 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 ABCC5O15440 1437 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 SPAG9O60271 1321 aaKnown RBP4.97□□□□□ -1.61
SSR1-207ENST00000479485 IL16Q14005 1332 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 TTC41PQ6P2S7 1318 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 PHLPP2Q6ZVD8 1323 aa4.97□□□□□ -1.61
SSR1-207ENST00000479485 KIF24Q5T7B8 1368 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3DA0A087WVF3 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3IA0A087WXS9 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3EA0A087X179 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3KA0A087X1G2 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3BA6NDS4 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3FA6NER0 549 aaPredicted RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 AGAP5A6NIR3 686 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3LB9A6J9 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 GOLGA6L19H0YKK7 550 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 POLR3GO15318 223 aaPredicted RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 LATS1O95835 1130 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 ALDOAP04075 364 aaKnown RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3HP0C7X1 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 GCFC2P16383 781 aaKnown RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 MCM3P25205 808 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 CST5P28325 142 aaPredicted RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 CD38P28907 300 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 EPHB2P29323 1055 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TACR3P29371 465 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 MPGP29372 298 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 HOXD12P35452 270 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 ZNF75DP51815 510 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 RWDD2BP57060 319 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TLE3Q04726 772 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 DDR1Q08345 913 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 ALDH1L2Q3SY69 923 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 CEP78Q5JTW2 689 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3GQ6DHY5 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 DGAT2L7PQ6IED9 249 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3CQ6IPX1 549 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 SYCE2Q6PIF2 218 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TMED8Q6PL24 325 aaPredicted RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 ZNF813Q6ZN06 617 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 PLA2G4DQ86XP0 818 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TBC1D3Q8IZP1 549 aaPredicted RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 CEP112Q8N8E3 955 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TDRD7Q8NHU6 1098 aaKnown RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 BICD2Q8TD16 824 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TCP11Q8WWU5 503 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 SMARCE1Q969G3 411 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 RILPL2Q969X0 211 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 ZBTB9Q96C00 473 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 CFAP53Q96M91 514 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 GPR78Q96P69 363 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 SENP7Q9BQF6 1050 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 SH2D3AQ9BRG2 576 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 FUCA2Q9BTY2 467 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 TAF1DQ9H5J8 278 aaPredicted RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 PRDM16Q9HAZ2 1276 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 SAYSD1Q9NPB0 183 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 DDX19AQ9NUU7 478 aaKnown RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 NDUFAF4Q9P032 175 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 CPSF2Q9P2I0 782 aaKnown RBP4.96□□□□□ -1.62
SSR1-207ENST00000479485 MAFFQ9ULX9 164 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 B3GNT3Q9Y2A9 372 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 HMGXB3Q12766 1538 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 SSH2Q76I76 1423 aa4.96□□□□□ -1.62
SSR1-207ENST00000479485 SHANK2Q9UPX8 1470 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 MBD3L5A6NJ08 208 aaPredicted RBP4.95□□□□□ -1.62
SSR1-207ENST00000479485 C3orf70A6NLC5 250 aaPredicted RBP4.95□□□□□ -1.62
SSR1-207ENST00000479485 CHUKO15111 745 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 HEXIM1O94992 359 aaKnown RBP4.95□□□□□ -1.62
SSR1-207ENST00000479485 CYP21A2P08686 494 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 DHRS4L1P0CG22 281 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 SKILP12757 684 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 SFPQP23246 707 aaKnown RBP eCLIP4.95□□□□□ -1.62
SSR1-207ENST00000479485 ELF1P32519 619 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 IDUAP35475 653 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 PRPHP41219 470 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 SLC37A1P57057 533 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 FOXL2P58012 376 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 YPEL5P62699 121 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 DMWDQ09019 674 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 FOXF2Q12947 444 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 PDCLQ13371 301 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 CUL4BQ13620 913 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 SLMAPQ14BN4 828 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 MIS18BP1Q6P0N0 1132 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 FAM43BQ6ZT52 329 aaPredicted RBP4.95□□□□□ -1.62
SSR1-207ENST00000479485 RFX8Q6ZV50 586 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 RFX6Q8HWS3 928 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 LRRC8AQ8IWT6 810 aa4.95□□□□□ -1.62
SSR1-207ENST00000479485 CCAR2Q8N163 923 aaKnown RBP4.95□□□□□ -1.62
SSR1-207ENST00000479485 SPC24Q8NBT2 197 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms