RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 SLC6A3Q01959 620 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 EXOC3L4Q17RC7 722 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 PTPN20Q4JDL3 420 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 SMYD5Q6GMV2 418 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 OR6B2Q6IFH4 312 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 DPY19L2P1Q6NXN4 242 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 Q6ZVU0 165 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 SLC26A9Q7LBE3 791 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 SH2D3CQ8N5H7 860 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 EID2Q8N6I1 236 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 ZNF397Q8NF99 534 aaPredicted RBP17.17■□□□□ 0.34
TRIM13-208ENST00000478111 KIAA1468Q9P260 1216 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 PTPRQQ9UMZ3 2332 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 GTF3C3Q9Y5Q9 886 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-208ENST00000478111 FOXN3O00409 490 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-208ENST00000478111 ALOX15BO15296 676 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 CLDN11O75508 207 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 DAB1O75553 588 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 CNTN5O94779 1100 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 MT-CO1P00395 513 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 C1SP09871 688 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 TFE3P19532 575 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-208ENST00000478111 MAT2AP31153 395 aaKnown RBP17.16■□□□□ 0.34
TRIM13-208ENST00000478111 NOS2P35228 1153 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 ARRB1P49407 418 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-208ENST00000478111 NME3Q13232 169 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 ZNF177Q13360 481 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-208ENST00000478111 ACCSLQ4AC99 568 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 SLC45A4Q5BKX6 768 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 ARTNQ5T4W7 220 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 DSG4Q86SJ6 1040 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 PRPF39Q86UA1 669 aaKnown RBP17.16■□□□□ 0.34
TRIM13-208ENST00000478111 SLC47A2Q86VL8 602 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 IQCHQ86VS3 1027 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 TRIM69Q86WT6 500 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 CREBRFQ8IUR6 639 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 ZNF683Q8IZ20 524 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 PIP4K2CQ8TBX8 421 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 NT5C3BQ969T7 300 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 PPP1R9BQ96SB3 815 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 PSMB7Q99436 277 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 NPY6RQ99463 290 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 PIGVQ9NUD9 493 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 SLC25A13Q9UJS0 675 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 VPS28Q9UK41 221 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 TRPM6Q9BX84 2022 aa17.16■□□□□ 0.34
TRIM13-208ENST00000478111 HELZ2Q9BYK8 2649 aaKnown RBP17.16■□□□□ 0.34
TRIM13-208ENST00000478111 MGAQ8IWI9 3026 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 SHROOM3Q8TF72 1996 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 A0A087WV48 116 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 E9PAM4 449 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 M0QYT0 321 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 RNF103O00237 685 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 RFPL3O75679 317 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 ADCY5O95622 1261 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 CTSLP07711 333 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 PNMA6AP0CW24 399 aaPredicted RBP17.15■□□□□ 0.34
TRIM13-208ENST00000478111 SRCP12931 536 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 CXCR3P49682 368 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 CDH4P55283 916 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 PTK2Q05397 1052 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 MTA1Q13330 715 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 CAMK4Q16566 473 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 POM121L1PQ3SYA9 428 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 ALFQ53S48 1182 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 FAM46CQ5VWP2 391 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 OXR1Q8N573 874 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 NOX5Q96PH1 765 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 SIK2Q9H0K1 926 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 PLCB1Q9NQ66 1216 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 ARHGEF38Q9NXL2 777 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 DNAJC12Q9UKB3 198 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 DMTF1Q9Y222 760 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 HS3ST2Q9Y278 367 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 CA5BQ9Y2D0 317 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 SNX10Q9Y5X0 201 aa17.15■□□□□ 0.34
TRIM13-208ENST00000478111 CFAP46Q8IYW2 2715 aa17.14■□□□□ 0.33
TRIM13-208ENST00000478111 SNAP91O60641 907 aa17.14■□□□□ 0.33
TRIM13-208ENST00000478111 NUDT1P36639 197 aa17.14■□□□□ 0.33
TRIM13-208ENST00000478111 PIP5KL1Q5T9C9 394 aa17.14■□□□□ 0.33
TRIM13-208ENST00000478111 FBXL19Q6PCT2 694 aa17.14■□□□□ 0.33
TRIM13-208ENST00000478111 FAM71AQ8IYT1 594 aa17.14■□□□□ 0.33
TRIM13-208ENST00000478111 OR2A12Q8NGT7 310 aa17.14■□□□□ 0.33
TRIM13-208ENST00000478111 BBC3Q96PG8 261 aaPredicted RBP17.14■□□□□ 0.33
TRIM13-208ENST00000478111 CHD5Q8TDI0 1954 aa17.14■□□□□ 0.33
TRIM13-208ENST00000478111 DRGXA6NNA5 263 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 C1QTNF3-AMACRE9PGA6 284 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 K7ERQ8 282 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 SMAD6O43541 496 aaKnown RBP17.13■□□□□ 0.33
TRIM13-208ENST00000478111 CDK4P11802 303 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 JUPP14923 745 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 KRT9P35527 623 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 OVGP1Q12889 678 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 ACAP1Q15027 740 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 TMEM145Q8NBT3 493 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 PGAP3Q96FM1 320 aaPredicted RBP17.13■□□□□ 0.33
TRIM13-208ENST00000478111 CRELD1Q96HD1 420 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 LRIG1Q96JA1 1093 aa17.13■□□□□ 0.33
TRIM13-208ENST00000478111 TKTL2Q9H0I9 626 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms