RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 FTCDO95954 541 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 ATP1A1P05023 1023 aaKnown RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 ATP5BP06576 529 aaKnown RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 DLDP09622 509 aaKnown RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 ADRA1BP35368 520 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 IL12RB1P42701 662 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 PXNP49023 591 aaPredicted RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 PEX5P50542 639 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 CDH4P55283 916 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 OXCT1P55809 520 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 NRG1Q02297 640 aaPredicted RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 SCAPQ12770 1279 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 ZNF234Q14588 700 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 PDK2Q15119 407 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 RAB6CQ53S08 254 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 FSCBQ5H9T9 825 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 MBLAC2Q68D91 279 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 ANO7Q6IWH7 933 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 CXorf57Q6NSI4 855 aaKnown RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 C14orf80Q86SX3 495 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 CIR1Q86X95 450 aaPredicted RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 CEP112Q8N8E3 955 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 SUMF1Q8NBK3 374 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 ACTRT1Q8TDG2 376 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 GAB3Q8WWW8 586 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 SORCS1Q8WY21 1168 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 NTAN1Q96AB6 310 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 TTC17Q96AE7 1141 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 OSBPL9Q96SU4 736 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 SIK2Q9H0K1 926 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 RAB6CQ9H0N0 254 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 TMEM245Q9H330 911 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 TMPRSS4Q9NRS4 437 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 HOMER3Q9NSC5 361 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 CACNA2D2Q9NY47 1150 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 DONSONQ9NYP3 566 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 INTS6Q9UL03 887 aaKnown RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 VANGL2Q9ULK5 521 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 TBC1D30Q9Y2I9 924 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 STON1Q9Y6Q2 735 aa10.06□□□□□ -0.8
NIFK-205ENST00000477693 MUC22E2RYF6 1773 aaPredicted RBP10.06□□□□□ -0.8
NIFK-205ENST00000477693 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.05□□□□□ -0.8
NIFK-205ENST00000477693 TCRBV21S2A2A0A5A6 115 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 DRGXA6NNA5 263 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 WASH3PC4AMC7 463 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 E9PAM4 449 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 KCNK3O14649 394 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 ENC1O14682 589 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 LRCH4O75427 683 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 ZNF189O75820 626 aaPredicted RBP10.05□□□□□ -0.8
NIFK-205ENST00000477693 ASLP04424 464 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 POLR2EP19388 210 aaKnown RBP10.05□□□□□ -0.8
NIFK-205ENST00000477693 MIPP30301 263 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 HTR7P34969 479 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 PTPN7P35236 360 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 GGCXP38435 758 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 CSKP41240 450 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 WASP42768 502 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 IRAK1P51617 712 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 OGDHQ02218 1023 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 ZNF177Q13360 481 aaPredicted RBP10.05□□□□□ -0.8
NIFK-205ENST00000477693 PTPRNQ16849 979 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 PLEKHG6Q3KR16 790 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 PITRM1Q5JRX3 1037 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 CCDC181Q5TID7 509 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 MANEALQ5VSG8 457 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 KIAA1211LQ6NV74 962 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 LRRC31Q6UY01 552 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 ASCL5Q7RTU5 278 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 SETD3Q86TU7 594 aaPredicted RBP10.05□□□□□ -0.8
NIFK-205ENST00000477693 RASGEF1CQ8N431 466 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 KDM1BQ8NB78 822 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 MYO19Q96H55 970 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 FRMD8P1Q9BZ68 369 aaPredicted RBP10.05□□□□□ -0.8
NIFK-205ENST00000477693 OSBPL2Q9H1P3 480 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 RETREG1Q9H6L5 497 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 RCOR3Q9P2K3 495 aaPredicted RBP10.05□□□□□ -0.8
NIFK-205ENST00000477693 PPARGC1AQ9UBK2 798 aaKnown RBP10.05□□□□□ -0.8
NIFK-205ENST00000477693 OR12D3Q9UGF7 316 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 USP18Q9UMW8 372 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 PLA2G4CQ9UP65 541 aa10.05□□□□□ -0.8
NIFK-205ENST00000477693 CACNA1GO43497 2377 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 ATG2BQ96BY7 2078 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 TMEM110-MUSTN1A8MSY1 372 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 DDX3YO15523 660 aaKnown RBP10.04□□□□□ -0.8
NIFK-205ENST00000477693 RPP40O75818 363 aaKnown RBP10.04□□□□□ -0.8
NIFK-205ENST00000477693 CNTN5O94779 1100 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 SRPRAP08240 638 aaKnown RBP10.04□□□□□ -0.8
NIFK-205ENST00000477693 GABRG2P18507 467 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 PRKCHP24723 683 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 SSR1P43307 286 aaKnown RBP10.04□□□□□ -0.8
NIFK-205ENST00000477693 PLK1P53350 603 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 SULT2A1Q06520 285 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 ZNF252P-AS1Q0IIN9 211 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 SRSF5Q13243 272 aaKnown RBP10.04□□□□□ -0.8
NIFK-205ENST00000477693 SIM2Q14190 667 aaPredicted RBP10.04□□□□□ -0.8
NIFK-205ENST00000477693 STARD3Q14849 445 aa10.04□□□□□ -0.8
NIFK-205ENST00000477693 FNDC3BQ53EP0 1204 aaKnown RBP10.04□□□□□ -0.8
NIFK-205ENST00000477693 USP39Q53GS9 565 aaKnown RBP10.04□□□□□ -0.8
NIFK-205ENST00000477693 ALFQ53S48 1182 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms