RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 MYCLP1P12525 358 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ETS2P15036 469 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 PDE6AP16499 860 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SLC5A2P31639 672 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SLC1A1P43005 524 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 GPD2P43304 727 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CRKP46108 304 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 MECOMQ03112 1051 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CLCQ05315 142 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 KRR1Q13601 381 aaKnown RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 UBE3CQ15386 1083 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 MAPK6Q16659 721 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 DGKDQ16760 1214 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 TCHHL1Q5QJ38 904 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF362Q5T0B9 420 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SEL1L2Q5TEA6 688 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 AGAP7PQ5VUJ5 663 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 C1orf146Q5VVC0 180 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 KAZNQ674X7 775 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ANKRD40Q6AI12 368 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CCSAPQ6IQ19 270 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 C11orf63Q6NUN7 778 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ALKBH5Q6P6C2 394 aaKnown RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 DCLRE1AQ6PJP8 1040 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 LPCAT2Q7L5N7 544 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ANKS1BQ7Z6G8 1248 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 NOP9Q86U38 636 aaKnown RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SLC51BQ86UW2 128 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 TTC30AQ86WT1 665 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CHSY1Q86X52 802 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 LURAP1LQ8IV03 231 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 KBTBD2Q8IY47 623 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SLC7A5P1Q8MH63 180 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CENPSQ8N2Z9 138 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 TTC30BQ8N4P2 665 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 AFAP1L2Q8N4X5 818 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 LZTR1Q8N653 840 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 TRIML2Q8N7C3 387 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 VGLL2Q8N8G2 317 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 FANCBQ8NB91 859 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 LILRB4Q8NHJ6 448 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 GRPEL2Q8TAA5 225 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SLC30A5Q8TAD4 765 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CHAC2Q8WUX2 184 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 S100ZQ8WXG8 99 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 JDP2Q8WYK2 163 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 DLG3Q92796 817 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SDCCAG3Q96C92 435 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CMTM5Q96DZ9 223 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 TSPAN17Q96FV3 270 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 KCNK16Q96T55 309 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 DDX50Q9BQ39 737 aaKnown RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 TUBA1CQ9BQE3 449 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SYT3Q9BQG1 590 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF747Q9BV97 191 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 AP1M1Q9BXS5 423 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 MROQ9BYG7 248 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 COA1Q9GZY4 146 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 WWP1Q9H0M0 922 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 EBF3Q9H4W6 596 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 LRRC19Q9H756 370 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 LY9Q9HBG7 655 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 MRPL40Q9NQ50 206 aaKnown RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 DDX18Q9NVP1 670 aaKnown RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ANKMY1Q9P2S6 941 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 GGT7Q9UJ14 662 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 APPL1Q9UKG1 709 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 PSMD13Q9UNM6 376 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SLC8A2Q9UPR5 921 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ERGIC3Q9Y282 383 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 ATP11BQ9Y2G3 1177 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 GDAQ9Y2T3 454 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 DTNAQ9Y4J8 743 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 HEY1Q9Y5J3 304 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 FER1L6Q2WGJ9 1857 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 SRCAPQ6ZRS2 3230 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 MYO3BQ8WXR4 1341 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 A0A087WXM4 84 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 A0A087X0T9 212 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 GTPBP10A4D1E9 387 aaKnown RBP4.83□□□□□ -1.64
PTCD3-212ENST00000477520 CFAP69A5D8W1 941 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 ANKRD34BA5PLL1 514 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 TRIM64BA6NI03 449 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 B2RBV5 119 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 ATP2A1O14983 1001 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 ACOX3O15254 700 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 THAP12O43422 761 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 SNAP91O60641 907 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 RSL1D1O76021 490 aaKnown RBP4.83□□□□□ -1.64
PTCD3-212ENST00000477520 FBXO21O94952 628 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 H6PDO95479 791 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 CHEK2O96017 543 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 SPATA31D3P0C874 917 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 FAM228BP0C875 321 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 CHRNB1P11230 501 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 UBL4AP11441 157 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 KRT3P12035 628 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 KRT5P13647 590 aa4.83□□□□□ -1.64
PTCD3-212ENST00000477520 NME1P15531 152 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms