RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MON2Q7Z3U7 1717 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 EDC4Q6P2E9 1401 aaKnown RBP4.58□□□□□ -1.68
UBR3-209ENST00000477461 NSD3Q9BZ95 1437 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 BRD4O60885 1362 aaPredicted RBP4.58□□□□□ -1.68
UBR3-209ENST00000477461 SPATA31A5Q5VU36 1347 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 SPATA31A7Q8IWB4 1347 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 ANP32CO43423 234 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 PLA2G6O60733 806 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 RFPL3SP0C7P2 107 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 SRGAP2BP0DMP2 458 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 HARSP12081 509 aaKnown RBP4.58□□□□□ -1.68
UBR3-209ENST00000477461 PEPDP12955 493 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 PECAM1P16284 738 aaPredicted RBP4.58□□□□□ -1.68
UBR3-209ENST00000477461 EGR1P18146 543 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 EEF1GP26641 437 aaKnown RBP4.58□□□□□ -1.68
UBR3-209ENST00000477461 MST1P26927 711 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 PGGT1BP53609 377 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 DMWDQ09019 674 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 PMS2P11Q13670 270 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 SLC5A9Q2M3M2 681 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.58□□□□□ -1.68
UBR3-209ENST00000477461 MRNIPQ6NTE8 343 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 KRT27Q7Z3Y8 459 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 MORC1Q86VD1 984 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 ADHFE1Q8IWW8 467 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 CLASRPQ8N2M8 674 aaKnown RBP4.58□□□□□ -1.68
UBR3-209ENST00000477461 ASB12Q8WXK4 309 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 STK33Q9BYT3 514 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 ARHGAP39Q9C0H5 1083 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 RXFP3Q9NSD7 469 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.58□□□□□ -1.68
UBR3-209ENST00000477461 CA14Q9ULX7 337 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 ICKQ9UPZ9 632 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 LAMP3Q9UQV4 416 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 MAN2B2Q9Y2E5 1009 aa4.58□□□□□ -1.68
UBR3-209ENST00000477461 ROBO1Q9Y6N7 1651 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 USP6P35125 1406 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 CPSF1Q10570 1443 aaKnown RBP4.57□□□□□ -1.68
UBR3-209ENST00000477461 POLR3AO14802 1390 aaPredicted RBP4.57□□□□□ -1.68
UBR3-209ENST00000477461 TTC21AQ8NDW8 1320 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 RHODO00212 210 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 KAT7O95251 611 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 WNT1P04628 370 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 SETSIPP0DME0 302 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 TBXAS1P24557 533 aaPredicted RBP4.57□□□□□ -1.68
UBR3-209ENST00000477461 HSPA7P48741 367 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 MAPKAPK3Q16644 382 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 MPEG1Q2M385 716 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 ARL6IP4Q66PJ3 421 aaKnown RBP4.57□□□□□ -1.68
UBR3-209ENST00000477461 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 TLDC1Q6P9B6 456 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 BRINP3Q76B58 766 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 LAS2Q8IYD9 372 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 TXLNBQ8N3L3 684 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 NUDCD2Q8WVJ2 157 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 OVCA2Q8WZ82 227 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 LPAR1Q92633 364 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 INPP5DQ92835 1189 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 MIB2Q96AX9 1013 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 TMEM41AQ96HV5 264 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 COG3Q96JB2 828 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 ZNF347Q96SE7 839 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 PRDM16Q9HAZ2 1276 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 ARFGAP3Q9NP61 516 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 RGL1Q9NZL6 768 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 SLC8A2Q9UPR5 921 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 PCDHB7Q9Y5E2 793 aa4.57□□□□□ -1.68
UBR3-209ENST00000477461 CD163L1Q9NR16 1453 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 NSD2O96028 1365 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 TTC21BQ7Z4L5 1316 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 ANKRD26Q9UPS8 1709 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 ABHD14A-ACY1A0A1B0GW23 586 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 RPS10-NUDT3A0A1W2PQS6 291 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 IFITM10A6NMD0 228 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 NFATC1O95644 943 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 SERPINB3P29508 390 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 MLH1P40692 756 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 RHBDL3P58872 404 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 ATP1A4Q13733 1029 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 KRT72Q14CN4 511 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 BRD3Q15059 726 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 RALBP1Q15311 655 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 ASIC2Q16515 512 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 GLE1Q53GS7 698 aaKnown RBP4.56□□□□□ -1.68
UBR3-209ENST00000477461 WASHC2DQ5SRD0 308 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 ZNF324BQ6AW86 544 aaPredicted RBP4.56□□□□□ -1.68
UBR3-209ENST00000477461 ZNF474Q6S9Z5 364 aaPredicted RBP4.56□□□□□ -1.68
UBR3-209ENST00000477461 Q6ZTC4 211 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 C18orf65Q6ZTR6 163 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 CTU1Q7Z7A3 348 aaKnown RBP4.56□□□□□ -1.68
UBR3-209ENST00000477461 DDIASQ8IXT1 998 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 GLIS1Q8NBF1 620 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 CENPIQ92674 756 aaPredicted RBP4.56□□□□□ -1.68
UBR3-209ENST00000477461 ZNF566Q969W8 418 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 KIAA1191Q96A73 305 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 VPS33BQ9H267 617 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 PCDHA7Q9UN72 937 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 NHSL1Q5SYE7 1610 aa4.56□□□□□ -1.68
UBR3-209ENST00000477461 PHLPP1O60346 1717 aa4.55□□□□□ -1.68
UBR3-209ENST00000477461 NPC1L1Q9UHC9 1359 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms