RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 VCX3AQ9NNX9 186 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 PADI3Q9ULW8 664 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 TNRC6CQ9HCJ0 1690 aaKnown RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 BCLAF3A2AJT9 711 aaKnown RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 GLTPD2A6NH11 291 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 H0Y626 953 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 LGR5O75473 907 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 USP1O94782 785 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 SLC2A3P11169 496 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 HOXD10P28358 340 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 RECQLP46063 649 aaPredicted RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 CDH13P55290 713 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 SLC20A2Q08357 652 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 GALNTL6Q49A17 601 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 FBXO48Q5FWF7 155 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 C16orf89Q6UX73 402 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 NIPA2Q8N8Q9 360 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 EBF4Q9BQW3 602 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 PHACTR1Q9C0D0 580 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 IL22Q9GZX6 179 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 PIGVQ9NUD9 493 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 TMEM216Q9P0N5 145 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 MARCH2Q9P0N8 246 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 XPR1Q9UBH6 696 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 ALDH2P05091 517 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 CCDC166P0CW27 439 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 ESRRGP62508 458 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 MRPS22P82650 360 aaKnown RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 MRPS35P82673 323 aaKnown RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 DSG1Q02413 1049 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 ZNF177Q13360 481 aaPredicted RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 PTK2BQ14289 1009 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 POLD3Q15054 466 aaPredicted RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 WASHC2DQ5SRD0 308 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 AP1ARQ63HQ0 302 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 CFAP52Q8N1V2 620 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 OR52K2Q8NGK3 314 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 ZBED3Q96IU2 234 aaPredicted RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 CCDC138Q96M89 665 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 BCO2Q9BYV7 579 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 CNGB3Q9NQW8 809 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 FAF1Q9UNN5 650 aaPredicted RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 MYH4Q9Y623 1939 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 PAGE1O75459 146 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 PSMG1O95456 288 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 APOA4P06727 396 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 GRIA4P48058 902 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 NPY2RP49146 381 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 PGGT1BP53609 377 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 CAPRIN1Q14444 709 aaKnown RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 ZNF460Q14592 562 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 TIGD7Q6NT04 549 aaPredicted RBP11.21□□□□□ -0.61
COL27A1-204ENST00000477421 OLFML1Q6UWY5 402 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 RIPOR1Q6ZS17 1223 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 LGI2Q8N0V4 545 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 TMEM86AQ8N2M4 240 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 SH3TC2Q8TF17 1288 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 POMKQ9H5K3 350 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 ALG9Q9H6U8 611 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 RGS18Q9NS28 235 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 DTNAQ9Y4J8 743 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 MYO7AQ13402 2215 aa11.21□□□□□ -0.61
COL27A1-204ENST00000477421 MAGEB16A2A368 324 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 GSC2O15499 205 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 PQBP1O60828 265 aaKnown RBP11.21□□□□□ -0.62
COL27A1-204ENST00000477421 SP100P23497 879 aaPredicted RBP11.21□□□□□ -0.62
COL27A1-204ENST00000477421 YWHAQP27348 245 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 HMOX2P30519 316 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 MAP3K10Q02779 954 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 LBRQ14739 615 aaKnown RBP11.21□□□□□ -0.62
COL27A1-204ENST00000477421 RFWD3Q6PCD5 774 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 C16orf59Q7L2K0 433 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 LPCAT1Q8NF37 534 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 SLC35F5Q8WV83 523 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 MRPL46Q9H2W6 279 aaKnown RBP11.21□□□□□ -0.62
COL27A1-204ENST00000477421 CDH9Q9ULB4 789 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 PKP3Q9Y446 797 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 PCDHB5Q9Y5E4 795 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 SLX4Q8IY92 1834 aa11.21□□□□□ -0.62
COL27A1-204ENST00000477421 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
COL27A1-204ENST00000477421 TK2O00142 265 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 NR5A2O00482 541 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 GLP2RO95838 553 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 SNAI1O95863 264 aaPredicted RBP11.2□□□□□ -0.62
COL27A1-204ENST00000477421 CKMP06732 381 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 CHRNA4P43681 627 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 CDH18Q13634 790 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 MAPRE2Q15555 327 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 PSMD5Q16401 504 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 CCDC153Q494R4 210 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 KHDC1Q4VXA5 237 aaKnown RBP11.2□□□□□ -0.62
COL27A1-204ENST00000477421 TEX44Q53QW1 395 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 KYQ8NBH2 561 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 DCAKDQ8WVC6 231 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 MORF4L1Q9UBU8 362 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 FBXO5Q9UKT4 447 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms