RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 MPP5Q8N3R9 675 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 FBXO36Q8NEA4 188 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 TTC16Q8NEE8 873 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 ARHGEF2Q92974 986 aaKnown RBP14.76□□□□□ -0.05
COL4A6-206ENST00000477085 OXNAD1Q96HP4 312 aaPredicted RBP14.76□□□□□ -0.05
COL4A6-206ENST00000477085 FERMT1Q9BQL6 677 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 MED4Q9NPJ6 270 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 RSPH14Q9UHP6 348 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 MSRAQ9UJ68 235 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 ACTL7AQ9Y615 435 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 ARHGAP42A6NI28 874 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 E7EVH7 732 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 EIF3HO15372 352 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 ELK3P41970 407 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 YBEYP58557 167 aaPredicted RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 SLC10A7Q0GE19 358 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 IHHQ14623 411 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 PARP15Q460N3 678 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 FSCBQ5H9T9 825 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 RABGAP1LQ5R372 815 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 KLHDC8BQ8IXV7 354 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 CMTM8Q8IZV2 173 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 OR7D4Q8NG98 312 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 SPATA22Q8NHS9 363 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 FATE1Q969F0 183 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 SIGLEC10Q96LC7 697 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 GCNAQ96QF7 691 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 TMBIM4Q9HC24 238 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 EIF2B3Q9NR50 452 aaKnown RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 RBM22Q9NW64 420 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 PIH1D1Q9NWS0 290 aaKnown RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 ZDHHC7Q9NXF8 308 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 UBP1Q9NZI7 540 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 ARHGAP26Q9UNA1 814 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 TBC1D30Q9Y2I9 924 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 RNF40O75150 1001 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 CLDN11O75508 207 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 ZNF189O75820 626 aaPredicted RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 GLDCP23378 1020 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 HOXD9P28356 352 aaPredicted RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 SSTR1P30872 391 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 GNA12Q03113 381 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 CXorf57Q6NSI4 855 aaKnown RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 TIGD7Q6NT04 549 aaPredicted RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 CAPN12Q6ZSI9 719 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 CEP128Q6ZU80 1094 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 TEX26Q8N6G2 289 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 ITFG1Q8TB96 612 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 EPS8L3Q8TE67 593 aaKnown RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 PYROXD1Q8WU10 500 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 USP13Q92995 863 aaPredicted RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 RUFY1Q96T51 708 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 TRIM56Q9BRZ2 755 aaKnown RBP14.75□□□□□ -0.05
COL4A6-206ENST00000477085 RETREG1Q9H6L5 497 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 TASP1Q9H6P5 420 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 SLC28A3Q9HAS3 691 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 PDFQ9HBH1 243 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 DONSONQ9NYP3 566 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 CHMP2BQ9UQN3 213 aa14.75□□□□□ -0.05
COL4A6-206ENST00000477085 SHROOM3Q8TF72 1996 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 OPA1O60313 960 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 TBL1XO60907 577 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 XYLBO75191 536 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 USP12O75317 370 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 SUN1O94901 812 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 PAPLNO95428 1278 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 PRAMEF12O95522 483 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 PFKLP17858 780 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 GYS2P54840 703 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 EIF3BP55884 814 aaKnown RBP14.74□□□□□ -0.05
COL4A6-206ENST00000477085 CBX1P83916 185 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 HNRNPDQ14103 355 aaKnown RBP14.74□□□□□ -0.05
COL4A6-206ENST00000477085 CBX2Q14781 532 aaPredicted RBP14.74□□□□□ -0.05
COL4A6-206ENST00000477085 RAB30Q15771 203 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 KCTD16Q68DU8 428 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 LRRC8BQ6P9F7 803 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 CHST9Q7L1S5 443 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 PGBD5Q8N414 524 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 WFDC5Q8TCV5 224 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 SH3RF2Q8TEC5 729 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 TMEM109Q9BVC6 243 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 GLOD4Q9HC38 313 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 CLEC4EQ9ULY5 219 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 SZT2Q5T011 3432 aa14.74□□□□□ -0.05
COL4A6-206ENST00000477085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 A0A1B0GVM2 712 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 TCAF2A6NFQ2 919 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 POLR3GO15318 223 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 PRAMEF11O60813 436 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 FGF19O95750 216 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 AP2A1O95782 977 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 MT-CYBP00156 380 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 ABHD2P08910 425 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 POU2F2P09086 479 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 CEBPBP17676 345 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 GCAP28676 217 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 SLCO1A2P46721 670 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 LMAN1P49257 510 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 CDK16Q00536 496 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms