RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 FECHP22830 423 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 EPHB2P29323 1055 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 GJC1P36383 396 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 TPMTP51580 245 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 POM121L1PQ3SYA9 428 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 ERMARDQ5T6L9 678 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 TCEAL6Q6IPX3 200 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 ARHGAP36Q6ZRI8 547 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 H2AFVQ71UI9 128 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 SETD3Q86TU7 594 aaPredicted RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 SLC41A1Q8IVJ1 513 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 CCDC117Q8IWD4 279 aaPredicted RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 SH2D3CQ8N5H7 860 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 CHST14Q8NCH0 376 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 OR2T3Q8NH03 318 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 HSPH1Q92598 858 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 ARHGEF2Q92974 986 aaKnown RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 TCEAL3Q969E4 200 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 HMCESQ96FZ2 354 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 CELF6Q96J87 481 aaKnown RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 CCDC42Q96M95 316 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 ACE2Q9BYF1 805 aaPredicted RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 TNKS2Q9H2K2 1166 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 GOLPH3Q9H4A6 298 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 MRPL47Q9HD33 250 aaKnown RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 RXFP3Q9NSD7 469 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 USP36Q9P275 1121 aaKnown RBP12.74□□□□□ -0.37
APTX-220ENST00000476858 SALL4Q9UJQ4 1053 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 CFAP54Q96N23 3096 aa12.74□□□□□ -0.37
APTX-220ENST00000476858 CHD5Q8TDI0 1954 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 PLXND1Q9Y4D7 1925 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 ILVBLA1L0T0 632 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 CBX4O00257 560 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 ATP9BO43861 1147 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 BNIP3LO60238 219 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 PRPSAP2O60256 369 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 MOCS3O95396 460 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 CTSLP07711 333 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 SRPRAP08240 638 aaKnown RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 TPM1P09493 284 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 SPEM2Q0P670 501 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 SLC12A1Q13621 1099 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 STARD3Q14849 445 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 DLG2Q15700 870 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 USP39Q53GS9 565 aaKnown RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 PPP6R3Q5H9R7 873 aaPredicted RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 PMS2CLQ68D20 193 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 MMAAQ8IVH4 418 aaKnown RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 ARHGAP12Q8IWW6 846 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 NIPA2Q8N8Q9 360 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 RTL3Q8N8U3 475 aaKnown RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 DCAF4L2Q8NA75 395 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 SLC35G2Q8TBE7 412 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 SIPA1Q96FS4 1042 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 ZC3H10Q96K80 434 aaKnown RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 RSPH9Q9H1X1 276 aaPredicted RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 ARRDC1-AS1Q9H2J1 176 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 ATP13A1Q9HD20 1204 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 TMEM74BQ9NUR3 256 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 FCF1Q9Y324 198 aaKnown RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 TNRC6BQ9UPQ9 1833 aaKnown RBP12.73□□□□□ -0.37
APTX-220ENST00000476858 DMXL1Q9Y485 3027 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 SDK1Q7Z5N4 2213 aa12.73□□□□□ -0.37
APTX-220ENST00000476858 LAMA1P25391 3075 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 PATE3B3GLJ2 98 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 RASA4BC9J798 803 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 EEF2KO00418 725 aaKnown RBP12.72□□□□□ -0.37
APTX-220ENST00000476858 NPC1O15118 1278 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 MID1O15344 667 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 RASA4O43374 803 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 RNF8O76064 485 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 PROSCO94903 275 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 ERCC2P18074 760 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 AMPD1P23109 780 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 IL4RP24394 825 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 GKP32189 559 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 ACSL1P33121 698 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 CNR2P34972 360 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 PCK1P35558 622 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 PSMD8P48556 350 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 ARSEP51690 589 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 TPI1P60174 286 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 ST8SIA6P61647 398 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 MTA1Q13330 715 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 DPYSQ14117 519 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 SF3A2Q15428 464 aaKnown RBP12.72□□□□□ -0.37
APTX-220ENST00000476858 ACCSLQ4AC99 568 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 C6orf118Q5T5N4 469 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 RFX8Q6ZV50 586 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.72□□□□□ -0.37
APTX-220ENST00000476858 AADATQ8N5Z0 425 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
APTX-220ENST00000476858 ACRBPQ8NEB7 543 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 LRRN4Q8WUT4 740 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 CTNNBL1Q8WYA6 563 aaPredicted RBP12.72□□□□□ -0.37
APTX-220ENST00000476858 TOE1Q96GM8 510 aaKnown RBP12.72□□□□□ -0.37
APTX-220ENST00000476858 SLC39A8Q9C0K1 460 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms