RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 TRAFD1O14545 582 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-216ENST00000476142 PMPCBO75439 489 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 GSRP00390 522 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 PROCP04070 461 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 GRK4P32298 578 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 NUMBP49757 651 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 PGGT1BP53609 377 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 LIMK2P53671 638 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 ITGA9Q13797 1035 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 UBAP2LQ14157 1087 aaKnown RBP9.1□□□□□ -0.95
CCDC66-216ENST00000476142 SCD5Q86SK9 330 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 ZNF354CQ86Y25 554 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 WDR75Q8IWA0 830 aaKnown RBP9.1□□□□□ -0.95
CCDC66-216ENST00000476142 PLD6Q8N2A8 252 aaKnown RBP9.1□□□□□ -0.95
CCDC66-216ENST00000476142 KLHDC9Q8NEP7 349 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 TBL1YQ9BQ87 522 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 SLC39A8Q9C0K1 460 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 ATXN3LQ9H3M9 355 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 DENND2DQ9H6A0 471 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-216ENST00000476142 CATSPERBQ9H7T0 1116 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 ARHGEF38Q9NXL2 777 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 NKX1-2Q9UD57 310 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-216ENST00000476142 TRPM7Q96QT4 1865 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 ARHGEF37A1IGU5 675 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 TMEM88BA6NKF7 163 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 SERPINE1P05121 402 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 RALBP11234 206 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 CPA3P15088 417 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 GM2AP17900 193 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 AVPR1AP37288 418 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 MXRA7P84157 204 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 TFAP2DQ7Z6R9 452 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 ARHGAP12Q8IWW6 846 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 ACVR1CQ8NER5 493 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 AGR3Q8TD06 166 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 FAM193BQ96PV7 902 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-216ENST00000476142 HAPLN3Q96S86 360 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 FSD1LQ9BXM9 530 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 SMOC2Q9H3U7 446 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 PNPOQ9NVS9 261 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 CPSF2Q9P2I0 782 aaKnown RBP9.1□□□□□ -0.95
CCDC66-216ENST00000476142 COPG2Q9UBF2 871 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 PCDHB8Q9UN66 801 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 SOX13Q9UN79 622 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 NEU3Q9UQ49 428 aa9.1□□□□□ -0.95
CCDC66-216ENST00000476142 MAGEB16A2A368 324 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 B2RBV5 119 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 E9PAM4 449 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 TADA2AO75478 443 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 WFS1O76024 890 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 IGLV3-25P01717 112 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 PRKCGP05129 697 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 CKBP12277 381 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 TYMPP19971 482 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 CYP2C18P33260 490 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 C1QTNF8P60827 252 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 SEPT6Q14141 434 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 KRT72Q14CN4 511 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 PCSK7Q16549 785 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 NOMO2Q5JPE7 1267 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 CLLU1OSQ5K130 101 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 BRMS1LQ5PSV4 323 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 STXBP5Q5T5C0 1151 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 C14orf80Q86SX3 495 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 RNF180Q86T96 592 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 LINC00523Q86TU6 105 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 ZNF598Q86UK7 904 aaKnown RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 RTN4RL1Q86UN2 441 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 TREML1Q86YW5 311 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 TEX9Q8N6V9 391 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 GIMAP7Q8NHV1 300 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 PIWIL2Q8TC59 973 aaKnown RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 URGCPQ8TCY9 931 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 NSMCE1Q8WV22 266 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 ZNF419Q96HQ0 510 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 VPS39Q96JC1 886 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 B3GALT6Q96L58 329 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 ACSS2Q9NR19 701 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 RBM22Q9NW64 420 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 OSER1Q9NX31 292 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 RNF186Q9NXI6 227 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 DNAJB4Q9UDY4 337 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 ADAM28Q9UKQ2 775 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 AAR2Q9Y312 384 aaKnown RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 HS3ST4Q9Y661 456 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 TLL2Q9Y6L7 1015 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 TNFRSF10BO14763 440 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 GSC2O15499 205 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 FGF10O15520 208 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 TIMM44O43615 452 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 MAFKO60675 156 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 PEX11AO75192 247 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 SOAT2O75908 522 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 CCNCP24863 283 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 PAPOLAP51003 745 aaKnown RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 ACLYP53396 1101 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 ITKQ08881 620 aa9.09□□□□□ -0.95
CCDC66-216ENST00000476142 TRIM71Q2Q1W2 868 aaKnown RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 CCSAPQ6IQ19 270 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-216ENST00000476142 RNPEPL1Q9HAU8 725 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms