RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 SYN3O14994 580 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TP73O15350 636 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 GPR37O15354 613 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TLL1O43897 1013 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 BCAS1O75363 584 aaPredicted RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 TRMUO75648 421 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 DCTN3O75935 186 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 KRT8P05787 483 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 HBQ1P09105 142 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SMIM6P0DI80 62 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SRGAP2CP0DJJ0 459 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 BMP2P12643 396 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SRCP12931 536 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 RARGP13631 454 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 CCNB1P14635 433 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TCP1P17987 556 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 PAMP19021 973 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 ITIH1P19827 911 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 RAB3AP20336 220 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 ITGALP20701 1170 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 GIFP27352 417 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 RBL1P28749 1068 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 PDIA3P30101 505 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 RPL5P46777 297 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 SLC26A2P50443 739 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 CASP5P51878 434 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 NKX2-5P52952 324 aaPredicted RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 PLK1P53350 603 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 CACNB3P54284 484 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 USP14P54578 494 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 EPHB4P54760 987 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 PTPN5P54829 565 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 MFAP3P55082 362 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 BCAR1P56945 870 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 NCALDP61601 193 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 RACK1P63244 317 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 CDK16Q00536 496 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SNX17Q15036 470 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TCEA2Q15560 299 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 LTB4RQ15722 352 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 PTPN21Q16825 1174 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TXNRD1Q16881 649 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SMTNL2Q2TAL5 461 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 EIF2S3LQ2VIR3 472 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 ANKRD20A4Q4UJ75 823 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 KLHL12Q53G59 568 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TRIM61Q5EBN2 209 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TNFAIP8L3Q5GJ75 292 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TOR1AIP1Q5JTV8 583 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 MARCH8Q5T0T0 291 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 C1orf185Q5T7R7 199 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 CDKAL1Q5VV42 579 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SLC9A4Q6AI14 798 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SULT6B1Q6IMI4 303 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 DENND5AQ6IQ26 1287 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 ARMC6Q6NXE6 501 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 JMJD6Q6NYC1 403 aaPredicted RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 TTC33Q6PID6 262 aaPredicted RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 DCLRE1AQ6PJP8 1040 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 DEGS2Q6QHC5 323 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 PAOXQ6QHF9 649 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 LMBR1LQ6UX01 489 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 VITQ6UXI7 678 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 MEX3BQ6ZN04 569 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 RFX8Q6ZV50 586 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TOM1L2Q6ZVM7 507 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SPATC1Q76KD6 591 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 C16orf59Q7L2K0 433 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TAS2R42Q7RTR8 314 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 FAM122BQ7Z309 247 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 HAUS6Q7Z4H7 955 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 NELFCDQ8IXH7 590 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 KIAA2013Q8IYS2 634 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 ULK2Q8IYT8 1036 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 RGL4Q8IZJ4 473 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 RNF113BQ8IZP6 322 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 ADSSL1Q8N142 457 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SYNPOQ8N3V7 929 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 MREGQ8N565 214 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 C12orf29Q8N999 325 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 PSD4Q8NDX1 1056 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 GSTCDQ8NEC7 633 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 OR5T1Q8NG75 326 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 RNASE11Q8TAA1 199 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 SLC30A5Q8TAD4 765 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 ETNPPLQ8TBG4 499 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 POC1BQ8TC44 478 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 NSUN6Q8TEA1 469 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 AENQ8WTP8 325 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 KBTBD7Q8WVZ9 684 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 SLC13A3Q8WWT9 602 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 DDX1Q92499 740 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 GTF3AQ92664 365 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 STAMQ92783 540 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 CAVIN3Q969G5 261 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 YIPF5Q969M3 257 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 FAM122AQ96E09 287 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 HMCESQ96FZ2 354 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 ZNF486Q96H40 463 aaPredicted RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 DYDC2Q96IM9 177 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms