RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 RENBPP51606 427 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 PMS2P54278 862 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 CDK16Q00536 496 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 FAM153CQ494X1 144 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 MPPE1Q53F39 396 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 ALFQ53S48 1182 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 TMCO4Q5TGY1 634 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 AFMIDQ63HM1 303 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 RFWD3Q6PCD5 774 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF783Q6ZMS7 281 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 TRMT10CQ7L0Y3 403 aaKnown RBP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 PRUNE1Q86TP1 453 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 ARHGAP12Q8IWW6 846 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 PDIK1LQ8N165 341 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 CPXM2Q8N436 756 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF557Q8N988 423 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 GLIS1Q8NBF1 620 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 CCDC110Q8TBZ0 833 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 SH3RF2Q8TEC5 729 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 UBLCP1Q8WVY7 318 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 FATE1Q969F0 183 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF707Q96C28 371 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 GDAP1L1Q96MZ0 367 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 SLC22A12Q96S37 553 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 PRRX2Q99811 253 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 PHACTR1Q9C0D0 580 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 NEUROG2Q9H2A3 272 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 TDP1Q9NUW8 608 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 TBC1D14Q9P2M4 693 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 FAM153AQ9UHL3 310 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 IPO11Q9UI26 975 aaKnown RBP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 ATP8A1Q9Y2Q0 1164 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 CFAP54Q96N23 3096 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 GREB1Q4ZG55 1949 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF318Q5VUA4 2279 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 SPTBN4Q9H254 2564 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 ILVBLA1L0T0 632 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 ERI2A8K979 691 aaKnown RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 H0Y626 953 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 KCNK1O00180 336 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 AP3B1O00203 1094 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TBL1XO60907 577 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 PPFIA2O75334 1257 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 CCNB1P14635 433 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 HOXB8P17481 243 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TPSB2P20231 275 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 PTPN3P26045 913 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 SLC6A4P31645 630 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 CCR2P41597 374 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 IFI35P80217 286 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 GNA12Q03113 381 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 IL10RBQ08334 325 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TPSAB1Q15661 275 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 SMAD2Q15796 467 aaKnown RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 HIF1AQ16665 826 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TEX44Q53QW1 395 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 HSP90B2PQ58FF3 399 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 DNAJC21Q5F1R6 531 aaKnown RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 PRSS36Q5K4E3 855 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 MPP7Q5T2T1 576 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 IL31Q6EBC2 164 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 ANKRD54Q6NXT1 300 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 RHBDF2Q6PJF5 856 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TMC5Q6UXY8 1006 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 Q6ZNB5 142 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 ERMP1Q7Z2K6 904 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TMC3Q7Z5M5 1100 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 CFAP52Q8N1V2 620 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TAB3Q8N5C8 712 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 KIAA1958Q8N8K9 716 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 PRSS33Q8NF86 280 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 DDI1Q8WTU0 396 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 CPT1BQ92523 772 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 PRCCQ92733 491 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 TTC25Q96NG3 672 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF599Q96NL3 588 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 FUT8Q9BYC5 575 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 S1PR5Q9H228 398 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 IGSF9Q9P2J2 1179 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 CD207Q9UJ71 328 aa12.5□□□□□ -0.41
MRPL55-227ENST00000475832 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-227ENST00000475832 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 GOLGA6L10A6NI86 522 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 MBTPS2O43462 519 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 OPA1O60313 960 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 MAFKO60675 156 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 ANXA9O76027 345 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 PAPLNO95428 1278 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 JCHAINP01591 159 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 APRTP07741 180 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 TCF3P15923 654 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 FSHRP23945 695 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 WEE1P30291 646 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 NTHL1P78549 312 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 WASHC5Q12768 1159 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms