RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 WASP42768 502 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 LMNB2Q03252 620 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 SLC20A2Q08357 652 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 KRT81Q14533 505 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 PDK2Q15119 407 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 CCDC6Q16204 474 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 IFI16Q16666 785 aaKnown RBP15.49■□□□□ 0.07
SNX13-207ENST00000475800 CA9Q16790 459 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 KCNT1Q5JUK3 1230 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 LRRC38Q5VT99 294 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 RETSATQ6NUM9 610 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 TMEM92Q6UXU6 159 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 WDR5BQ86VZ2 330 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 LONP2Q86WA8 852 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 MAP7D3Q8IWC1 876 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 LRRC8AQ8IWT6 810 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 UMODL1-AS1Q8N2C9 162 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 ACRBPQ8NEB7 543 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 OR52K2Q8NGK3 314 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 HHIPQ96QV1 700 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 ZDHHC4Q9NPG8 344 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 DNAI1Q9UI46 699 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 HPCAL4Q9UM19 191 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 REXO2Q9Y3B8 237 aaKnown RBP15.49■□□□□ 0.07
SNX13-207ENST00000475800 EML5Q05BV3 1969 aa15.49■□□□□ 0.07
SNX13-207ENST00000475800 NYNRINQ9P2P1 1898 aaKnown RBP15.48■□□□□ 0.07
SNX13-207ENST00000475800 A0A0D9SEW6 157 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.48■□□□□ 0.07
SNX13-207ENST00000475800 A0A1W2PQF6 199 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 TCRBV21S2A2A0A5A6 115 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 ZSCAN5CA6NGD5 496 aaPredicted RBP15.48■□□□□ 0.07
SNX13-207ENST00000475800 AXIN1O15169 862 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 EPHX1P07099 455 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 TCF4P15884 667 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 GOT1P17174 413 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 CLCN6P51797 869 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 NDST2P52849 883 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 CDH6P55285 790 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 GEMIN4P57678 1058 aaKnown RBP15.48■□□□□ 0.07
SNX13-207ENST00000475800 KIF5AQ12840 1032 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 GSE1Q14687 1217 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 POLD3Q15054 466 aaPredicted RBP15.48■□□□□ 0.07
SNX13-207ENST00000475800 PARP15Q460N3 678 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 LAIR1Q6GTX8 287 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 C11orf63Q6NUN7 778 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 RASSF3Q86WH2 238 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 LZTR1Q8N653 840 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 GPR161Q8N6U8 529 aaKnown RBP15.48■□□□□ 0.07
SNX13-207ENST00000475800 FAM71BQ8TC56 605 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 MRGPRX3Q96LB0 322 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 ATP13A1Q9HD20 1204 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 CWC15Q9P013 229 aaKnown RBP15.48■□□□□ 0.07
SNX13-207ENST00000475800 BCCIPQ9P287 314 aaKnown RBP eCLIP15.48■□□□□ 0.078e-7■■■■□ 21.9
SNX13-207ENST00000475800 HS3ST2Q9Y278 367 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 PLXND1Q9Y4D7 1925 aa15.48■□□□□ 0.07
SNX13-207ENST00000475800 EDDM13A0A1B0GTR0 161 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 TARSL2A2RTX5 802 aaKnown RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 WASH3PC4AMC7 463 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 SPOPO43791 374 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 ERCC2P18074 760 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 PRKCHP24723 683 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 NAP1L1P55209 391 aaKnown RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 CAMK2GQ13555 558 aaPredicted RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 BYSLQ13895 437 aaKnown RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 DPYSQ14117 519 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 HNRNPA1L2Q32P51 320 aaKnown RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 ZFYVE27Q5T4F4 411 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 IL31Q6EBC2 164 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 TXNRD3NBQ6F5E7 133 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 ANO7Q6IWH7 933 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 METTL3Q86U44 580 aaKnown RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 VSIG1Q86XK7 387 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 RHOT1Q8IXI2 618 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 KCTD6Q8NC69 237 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 OR7D4Q8NG98 312 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 ARHGEF2Q92974 986 aaKnown RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 MYO19Q96H55 970 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 PSMB7Q99436 277 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 ZNF670Q9BS34 389 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 SPON2Q9BUD6 331 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 ACE2Q9BYF1 805 aaPredicted RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 TSGA10Q9BZW7 698 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 PCDH18Q9HCL0 1135 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 CD248Q9HCU0 757 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 NDFIP2Q9NV92 336 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 DDX56Q9NY93 547 aaKnown RBP15.47■□□□□ 0.07
SNX13-207ENST00000475800 VPS51Q9UID3 782 aa15.47■□□□□ 0.07
SNX13-207ENST00000475800 RCCD1A6NED2 376 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 ARHGAP42A6NI28 874 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 PRR5-ARHGAP8B1AHC4 643 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 ZNF487B1APH4 448 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 CBX4O00257 560 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 PSTPIP1O43586 416 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 ATP9BO43861 1147 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 GDF9O60383 454 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 BUB1BO60566 1050 aaPredicted RBP15.46■□□□□ 0.07
SNX13-207ENST00000475800 COMTP21964 271 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 SERPINB6P35237 376 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 GJC1P36383 396 aa15.46■□□□□ 0.07
SNX13-207ENST00000475800 CTSOP43234 321 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms