RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 SLC2A14Q8TDB8 520 aa14.54□□□□□ -0.08
ATG9A-220ENST00000475339 MED15Q96RN5 788 aa14.54□□□□□ -0.08
ATG9A-220ENST00000475339 TWNKQ96RR1 684 aa14.54□□□□□ -0.08
ATG9A-220ENST00000475339 INTS2Q9H0H0 1204 aaKnown RBP14.54□□□□□ -0.08
ATG9A-220ENST00000475339 TMEM63CQ9P1W3 806 aa14.54□□□□□ -0.08
ATG9A-220ENST00000475339 ARHGAP20Q9P2F6 1191 aa14.54□□□□□ -0.08
ATG9A-220ENST00000475339 RASAL2Q9UJF2 1139 aa14.54□□□□□ -0.08
ATG9A-220ENST00000475339 NAGPAQ9UK23 515 aa14.54□□□□□ -0.08
ATG9A-220ENST00000475339 RNASEH1O60930 286 aaKnown RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 ATP5BP06576 529 aaKnown RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 TPM2P07951 284 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 ITGA2BP08514 1039 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 SLC5A2P31639 672 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 CASRP41180 1078 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 MLLT3P42568 568 aaPredicted RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 EFEMP1Q12805 493 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 MAN2A1Q16706 1144 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 POM121L1PQ3SYA9 428 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 RBM44Q6ZP01 1051 aaKnown RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 SCD5Q86SK9 330 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 C14orf80Q86SX3 495 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 PRPF39Q86UA1 669 aaKnown RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 AHI1Q8N157 1196 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 C12orf29Q8N999 325 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 ENOX1Q8TC92 643 aaKnown RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 HEXIM2Q96MH2 286 aaKnown RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 NAT10Q9H0A0 1025 aaKnown RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 CSNK1G1Q9HCP0 422 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 GGA2Q9UJY4 613 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 PLAAQ9Y263 795 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 PCDHGA4Q9Y5G9 962 aa14.53□□□□□ -0.08
ATG9A-220ENST00000475339 ZFC3H1O60293 1989 aaKnown RBP14.53□□□□□ -0.08
ATG9A-220ENST00000475339 COL27A1Q8IZC6 1860 aaPredicted RBP14.52□□□□□ -0.08
ATG9A-220ENST00000475339 CASC3O15234 703 aaKnown RBP14.52□□□□□ -0.09
ATG9A-220ENST00000475339 ALPPL2P10696 532 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 PABPC1P11940 636 aaKnown RBP14.52□□□□□ -0.09
ATG9A-220ENST00000475339 GOT1P17174 413 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 TYRO3Q06418 890 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 CDKN3Q16667 212 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 MPPE1Q53F39 396 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 CRTC1Q6UUV9 634 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 GBP6Q6ZN66 633 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 C11orf57Q6ZUT1 292 aaPredicted RBP14.52□□□□□ -0.09
ATG9A-220ENST00000475339 SND1Q7KZF4 910 aaKnown RBP eCLIP14.52□□□□□ -0.09
ATG9A-220ENST00000475339 KIAA0907Q7Z7F0 614 aaPredicted RBP14.52□□□□□ -0.09
ATG9A-220ENST00000475339 TADA2BQ86TJ2 420 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 IRF2BP1Q8IU81 584 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 FAM217AQ8IXS0 508 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.52□□□□□ -0.09
ATG9A-220ENST00000475339 EHBP1Q8NDI1 1231 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 ANKRD20A12PQ8NF67 263 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 HTR3CQ8WXA8 447 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 CYFIP2Q96F07 1278 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 KLHDC7BQ96G42 594 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 MYO19Q96H55 970 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 CRACR2AQ9BSW2 395 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 FUCA2Q9BTY2 467 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 KLHL11Q9NVR0 708 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 NLGN3Q9NZ94 848 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 TPX2Q9ULW0 747 aaKnown RBP14.52□□□□□ -0.09
ATG9A-220ENST00000475339 LRBAP50851 2863 aa14.52□□□□□ -0.09
ATG9A-220ENST00000475339 DOCK9Q9BZ29 2069 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 CPED1A4D0V7 1026 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 HHLA1C9JL84 531 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 K7ESM1 405 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 PIAS2O75928 621 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 NEBLO76041 1014 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 RALAP11233 206 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 CD19P15391 556 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 POLR2EP19388 210 aaKnown RBP14.51□□□□□ -0.09
ATG9A-220ENST00000475339 WT1P19544 449 aaPredicted RBP14.51□□□□□ -0.09
ATG9A-220ENST00000475339 EEF1GP26641 437 aaKnown RBP14.51□□□□□ -0.09
ATG9A-220ENST00000475339 PSMD8P48556 350 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 HARS2P49590 506 aaKnown RBP14.51□□□□□ -0.09
ATG9A-220ENST00000475339 SLC8A3P57103 927 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 MYL5Q02045 173 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 EXOC3L4Q17RC7 722 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 KLHL40Q2TBA0 621 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 HNRNPA1L2Q32P51 320 aaKnown RBP14.51□□□□□ -0.09
ATG9A-220ENST00000475339 C9orf64Q5T6V5 341 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 RRAGAQ7L523 313 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 VASH2Q86V25 355 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 TUBGCP2Q9BSJ2 902 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 USP29Q9HBJ7 922 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 PCDHB4Q9Y5E5 795 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 RP1P56715 2156 aa14.51□□□□□ -0.09
ATG9A-220ENST00000475339 CSMD1Q96PZ7 3565 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 CCDC187A0A096LP49 1063 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.5□□□□□ -0.09
ATG9A-220ENST00000475339 GTPBP10A4D1E9 387 aaKnown RBP14.5□□□□□ -0.09
ATG9A-220ENST00000475339 LETM1O95202 739 aaPredicted RBP14.5□□□□□ -0.09
ATG9A-220ENST00000475339 CD70P32970 193 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 RAD23BP54727 409 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 GCNT1Q02742 428 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 KCNMA1Q12791 1236 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 ZNF177Q13360 481 aaPredicted RBP14.5□□□□□ -0.09
ATG9A-220ENST00000475339 VWA3BQ502W6 1294 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 TCP11X2Q5H9J9 407 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 GUSBP11Q6P575 273 aa14.5□□□□□ -0.09
ATG9A-220ENST00000475339 TMEM270Q6UE05 265 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms