RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 BOLA3Q53S33 107 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 KCNT1Q5JUK3 1230 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 TXNRD3NBQ6F5E7 133 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.61■□□□□ 0.25
SRM-204ENST00000475189 C11orf74Q86VG3 221 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 CPNE8Q86YQ8 564 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 SLC35G2Q8TBE7 412 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 PRCCQ92733 491 aaPredicted RBP16.61■□□□□ 0.25
SRM-204ENST00000475189 ARHGEF2Q92974 986 aaKnown RBP16.61■□□□□ 0.25
SRM-204ENST00000475189 SPACA7Q96KW9 195 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 FAM129BQ96TA1 746 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 MAGEH1Q9H213 219 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 NOL6Q9H6R4 1146 aaKnown RBP16.61■□□□□ 0.25
SRM-204ENST00000475189 CATSPERBQ9H7T0 1116 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 ZWILCHQ9H900 591 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 ATP13A1Q9HD20 1204 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 ITM2CQ9NQX7 267 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 USP36Q9P275 1121 aaKnown RBP16.61■□□□□ 0.25
SRM-204ENST00000475189 INTUQ9ULD6 942 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 CYP8B1Q9UNU6 501 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 HS3ST2Q9Y278 367 aa16.61■□□□□ 0.25
SRM-204ENST00000475189 CBX4O00257 560 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 RAMP2O60895 175 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 RARAP10276 462 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 SRCP12931 536 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 VAV1P15498 845 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 GOT1P17174 413 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 ETFBP38117 255 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 MAGEA1P43355 309 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 RPS14P62263 151 aaKnown RBP16.6■□□□□ 0.25
SRM-204ENST00000475189 DLG2Q15700 870 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 SMTNL2Q2TAL5 461 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 PPP6R3Q5H9R7 873 aaPredicted RBP16.6■□□□□ 0.25
SRM-204ENST00000475189 PMS2CLQ68D20 193 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 IL31Q6EBC2 164 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 LINGO4Q6UY18 593 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 CACUL1Q86Y37 369 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 TMTC1Q8IUR5 882 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 RHOT2Q8IXI1 618 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 DCLK2Q8N568 766 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 TEKT4Q8WW24 435 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 RUBCNQ92622 972 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 RSPH9Q9H1X1 276 aaPredicted RBP16.6■□□□□ 0.25
SRM-204ENST00000475189 IMPACTQ9P2X3 320 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 GVINP1Q7Z2Y8 2422 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 ZNF292O60281 2723 aa16.6■□□□□ 0.25
SRM-204ENST00000475189 SOWAHDA6NJG2 315 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 K7ERQ8 282 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 MAP3K13O43283 966 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 SMAD6O43541 496 aaKnown RBP16.59■□□□□ 0.25
SRM-204ENST00000475189 MTA2O94776 668 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 RHOBTB1O94844 696 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 RETP07949 1114 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 ACADMP11310 421 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 CYLC1P35663 651 aaPredicted RBP16.59■□□□□ 0.25
SRM-204ENST00000475189 HCAR3P49019 387 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 TPMTP51580 245 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 ZNF135P52742 658 aaPredicted RBP16.59■□□□□ 0.25
SRM-204ENST00000475189 ARF5P84085 180 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 POLD3Q15054 466 aaPredicted RBP16.59■□□□□ 0.25
SRM-204ENST00000475189 ELF2Q15723 593 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 DPYSL2Q16555 572 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 ACCSLQ4AC99 568 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 ZNF776Q68DI1 518 aaPredicted RBP16.59■□□□□ 0.25
SRM-204ENST00000475189 RFX8Q6ZV50 586 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 UMODL1-AS1Q8N2C9 162 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 STK40Q8N2I9 435 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 ATP11CQ8NB49 1132 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 SPC24Q8NBT2 197 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 RFFLQ8WZ73 363 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 HSPH1Q92598 858 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 LOXL4Q96JB6 756 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 CWC15Q9P013 229 aaKnown RBP16.59■□□□□ 0.25
SRM-204ENST00000475189 NCDNQ9UBB6 729 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 LCMT1Q9UIC8 334 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 GMEB2Q9UKD1 530 aa16.59■□□□□ 0.25
SRM-204ENST00000475189 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 CXorf51AA0A1B0GTR3 108 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 DAPK3O43293 454 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 EPN2O95208 641 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 CD160O95971 181 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 IGLV3-19P01714 112 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 ERCC2P18074 760 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 MAN1A1P33908 653 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 SSR1P43307 286 aaKnown RBP16.58■□□□□ 0.24
SRM-204ENST00000475189 YBEYP58557 167 aaPredicted RBP16.58■□□□□ 0.24
SRM-204ENST00000475189 ZBTB16Q05516 673 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 SLC20A2Q08357 652 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 DPYSQ14117 519 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 MESDQ14696 234 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 TCEAL1Q15170 157 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 HADHQ16836 314 aaKnown RBP16.58■□□□□ 0.24
SRM-204ENST00000475189 RETSATQ6NUM9 610 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 SLC36A4Q6YBV0 504 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 POLNQ7Z5Q5 900 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 TMEFF1Q8IYR6 380 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 KLC2Q9H0B6 622 aa16.58■□□□□ 0.24
SRM-204ENST00000475189 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.58■□□□□ 0.24
SRM-204ENST00000475189 WSB2Q9NYS7 404 aaPredicted RBP16.58■□□□□ 0.24
SRM-204ENST00000475189 PCDHA13Q9Y5I0 950 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms