RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 SOCS4Q8WXH5 440 aa12.71□□□□□ -0.37
RNF220-211ENST00000474956 PPP2R3CQ969Q6 453 aa12.71□□□□□ -0.37
RNF220-211ENST00000474956 CLPTM1LQ96KA5 538 aa12.71□□□□□ -0.37
RNF220-211ENST00000474956 RILPQ96NA2 401 aa12.71□□□□□ -0.37
RNF220-211ENST00000474956 LYPLA1O75608 230 aaPredicted RBP12.71□□□□□ -0.38
RNF220-211ENST00000474956 BAG2O95816 211 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 ZFXP17010 805 aaPredicted RBP12.71□□□□□ -0.38
RNF220-211ENST00000474956 TPSB2P20231 275 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 SCNN1AP37088 669 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 SEMA3BQ13214 749 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 DYNC1I2Q13409 638 aaKnown RBP12.71□□□□□ -0.38
RNF220-211ENST00000474956 PPP2R5DQ14738 602 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 TPSAB1Q15661 275 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 RAB41Q5JT25 222 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 AAGABQ6PD74 315 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 OTOP3Q7RTS5 596 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 MOCS1Q9NZB8 636 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 OR12D3Q9UGF7 316 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 FBXW11Q9UKB1 542 aa12.71□□□□□ -0.38
RNF220-211ENST00000474956 ABT1Q9ULW3 272 aaKnown RBP12.71□□□□□ -0.38
RNF220-211ENST00000474956 BIRC5O15392 142 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 SNNO75324 88 aaPredicted RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 SOAT2O75908 522 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 ZCCHC18P0CG32 403 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 ALDH18A1P54886 795 aaKnown RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 DLG2Q15700 870 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 RWDD4Q6NW29 188 aaKnown RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 SPATA22Q8NHS9 363 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 DDX50Q9BQ39 737 aaKnown RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 MLPHQ9BV36 600 aaPredicted RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 CAB39LQ9H9S4 337 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 SOX13Q9UN79 622 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 Q9Y3F1 56 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 HBS1LQ9Y450 684 aaKnown RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 PRR5-ARHGAP8B1AHC4 643 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 TPP1O14773 563 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 ATP9BO43861 1147 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 PRKAR2AP13861 404 aaKnown RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 ERFP50548 548 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 ARHGAP8P85298 464 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 CDC16Q13042 620 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 RTN4RL1Q86UN2 441 aaPredicted RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 RNF34Q969K3 372 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 TRPV6Q9H1D0 765 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 WDCPQ9H6R7 721 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 DMAP1Q9NPF5 467 aaPredicted RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 TMEM88BA6NKF7 163 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 MOCS2O96007 188 aaPredicted RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 AOC1P19801 751 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 KCNA4P22459 653 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 LHX1P48742 406 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 RPS6KA3P51812 740 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 CUL3Q13618 768 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 RASIP1Q5U651 963 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 DQX1Q8TE96 717 aaKnown RBP12.7□□□□□ -0.38
RNF220-211ENST00000474956 TUBGCP5Q96RT8 1024 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 SIKE1Q9BRV8 207 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 SLC38A7Q9NVC3 462 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 OSER1Q9NX31 292 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 EMCNQ9ULC0 261 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 PPM1HQ9ULR3 514 aa12.7□□□□□ -0.38
RNF220-211ENST00000474956 ZNF487B1APH4 448 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 DDHD2O94830 711 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 GSRP00390 522 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 BPGMP07738 259 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 NFKB1P19838 968 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 GSTT1P30711 240 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 CRHR1P34998 444 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 STX3Q13277 289 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 MBTPS1Q14703 1052 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 PAFAH1B3Q15102 231 aaKnown RBP12.69□□□□□ -0.38
RNF220-211ENST00000474956 LRRC39Q96DD0 335 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 SMARCD1Q96GM5 515 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 NMUR1Q9HB89 426 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 THAP1Q9NVV9 213 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 RPS6KL1Q9Y6S9 549 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 C5orf42Q9H799 3197 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 ITM2AO43736 263 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 AOC2O75106 756 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 MT-CYBP00156 380 aaPredicted RBP12.69□□□□□ -0.38
RNF220-211ENST00000474956 JCHAINP01591 159 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 ARRB2P32121 409 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
RNF220-211ENST00000474956 HNRNPDQ14103 355 aaKnown RBP12.69□□□□□ -0.38
RNF220-211ENST00000474956 PDCD2Q16342 344 aaPredicted RBP12.69□□□□□ -0.38
RNF220-211ENST00000474956 WDR75Q8IWA0 830 aaKnown RBP12.69□□□□□ -0.38
RNF220-211ENST00000474956 CENPKQ9BS16 269 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 CNGB3Q9NQW8 809 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 CHRAC1Q9NRG0 131 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 CDH9Q9ULB4 789 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 PRG3Q9Y2Y8 225 aaPredicted RBP12.69□□□□□ -0.38
RNF220-211ENST00000474956 TET1Q8NFU7 2136 aa12.69□□□□□ -0.38
RNF220-211ENST00000474956 SDR42E2A6NKP2 422 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 DFFAO00273 331 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 BUD23O43709 281 aaKnown RBP12.68□□□□□ -0.38
RNF220-211ENST00000474956 PBX3P40426 434 aa12.68□□□□□ -0.38
RNF220-211ENST00000474956 GLUD2P49448 558 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms