RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 EBNA1BP2Q99848 306 aaKnown RBP20.21■□□□□ 0.83
SSR1-204ENST00000474597 ACSS3Q9H6R3 686 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 ZNF212Q9UDV6 495 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 AAR2Q9Y312 384 aaKnown RBP20.21■□□□□ 0.83
SSR1-204ENST00000474597 CPQQ9Y646 472 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 SDR42E2A6NKP2 422 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 GRXCR1A8MXD5 290 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 TRDMT1O14717 391 aaKnown RBP20.2■□□□□ 0.82
SSR1-204ENST00000474597 LATS1O95835 1130 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 CKMP06732 381 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 TMED2Q15363 201 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 MAB21L3Q8N8X9 362 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 DNAAF3Q8N9W5 541 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 SLC22A17Q8WUG5 538 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 MAML1Q92585 1016 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 PABPC5Q96DU9 382 aaKnown RBP20.2■□□□□ 0.82
SSR1-204ENST00000474597 MRRFQ96E11 262 aaKnown RBP20.2■□□□□ 0.82
SSR1-204ENST00000474597 XPO6Q96QU8 1125 aaKnown RBP20.2■□□□□ 0.82
SSR1-204ENST00000474597 SLC22A12Q96S37 553 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 CYTH2Q99418 400 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 GORASP1Q9BQQ3 440 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 LRRC40Q9H9A6 602 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 GLOD4Q9HC38 313 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 LGALS13Q9UHV8 139 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 SLC24A2Q9UI40 661 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 GBF1Q92538 1859 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 GRM6O15303 877 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 CLDN11O75508 207 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 ANXA9O76027 345 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 SUN1O94901 812 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 OLFM2O95897 454 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 CA3P07451 260 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 SKOR1P84550 965 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 HNRNPDQ14103 355 aaKnown RBP20.2■□□□□ 0.82
SSR1-204ENST00000474597 C9orf50Q5SZB4 431 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 MARC1Q5VT66 337 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 NAPEPLDQ6IQ20 393 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 RTL10Q7L3V2 364 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 OTOP3Q7RTS5 596 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 TDRPQ86YL5 185 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 MPP5Q8N3R9 675 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 TTC16Q8NEE8 873 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 ARHGEF2Q92974 986 aaKnown RBP20.2■□□□□ 0.82
SSR1-204ENST00000474597 FATE1Q969F0 183 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 STAMBPL1Q96FJ0 436 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 FCRL5Q96RD9 977 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 LRRC3Q9BY71 257 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 UBP1Q9NZI7 540 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 FETUBQ9UGM5 382 aa20.2■□□□□ 0.82
SSR1-204ENST00000474597 LSM7Q9UK45 103 aaKnown RBP20.2■□□□□ 0.82
SSR1-204ENST00000474597 TRAV19A0A0A6YYK7 116 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 A0A1W2PRU2 124 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 A6NNZ2 444 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 J3KR12 359 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 AP3B1O00203 1094 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 HLA-DQB2P05538 268 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 MGAT1P26572 445 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 RPS24P62847 133 aaKnown RBP20.19■□□□□ 0.82
SSR1-204ENST00000474597 IL10RBQ08334 325 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 SERINC3Q13530 473 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 TUBB8Q3ZCM7 444 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 TNFAIP8L3Q5GJ75 292 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 KCTD11Q693B1 232 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 SPRED2Q7Z698 418 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 CCNJLQ8IV13 435 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 OR52K1Q8NGK4 314 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 WBP2Q969T9 261 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 ZFRQ96KR1 1074 aaKnown RBP20.19■□□□□ 0.82
SSR1-204ENST00000474597 PRICKLE1Q96MT3 831 aaPredicted RBP20.19■□□□□ 0.82
SSR1-204ENST00000474597 SAMD11Q96NU1 681 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 TGS1Q96RS0 853 aaKnown RBP20.19■□□□□ 0.82
SSR1-204ENST00000474597 SELENOSQ9BQE4 189 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 MLPHQ9BV36 600 aaPredicted RBP20.19■□□□□ 0.82
SSR1-204ENST00000474597 CAPS2Q9BXY5 557 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 MAN1C1Q9NR34 630 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 PIH1D1Q9NWS0 290 aaKnown RBP20.19■□□□□ 0.82
SSR1-204ENST00000474597 PSD3Q9NYI0 1048 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 SAMD15Q9P1V8 674 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 PSMC3IPQ9P2W1 217 aaPredicted RBP20.19■□□□□ 0.82
SSR1-204ENST00000474597 IKBKGQ9Y6K9 419 aa20.19■□□□□ 0.82
SSR1-204ENST00000474597 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.18■□□□□ 0.82
SSR1-204ENST00000474597 TCRBV9S1A1TA0A576 114 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 TYW5A2RUC4 315 aaKnown RBP20.18■□□□□ 0.82
SSR1-204ENST00000474597 TSPAN3O60637 253 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 ARHGEF15O94989 841 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 FGF19O95750 216 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 IRS1P35568 1242 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 MSH2P43246 934 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 GEMP55040 296 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 ZNF177Q13360 481 aaPredicted RBP20.18■□□□□ 0.82
SSR1-204ENST00000474597 EFTUD2Q15029 972 aaKnown RBP eCLIP20.18■□□□□ 0.825e-7■■■□□ 16.7
SSR1-204ENST00000474597 EMC10Q5UCC4 262 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 TTC39BQ5VTQ0 682 aaPredicted RBP20.18■□□□□ 0.82
SSR1-204ENST00000474597 LINC00523Q86TU6 105 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 MAGEH1Q9H213 219 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 CNOT10Q9H9A5 744 aaKnown RBP20.18■□□□□ 0.82
SSR1-204ENST00000474597 BFARQ9NZS9 450 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 PCDHA11Q9Y5I1 949 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 A0A1B0GVM2 712 aa20.18■□□□□ 0.82
SSR1-204ENST00000474597 TCAF2A6NFQ2 919 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms