RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PON1P27169 355 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 RRM2P31350 389 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 C10orf62Q5T681 223 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 INTS11Q5TA45 600 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 FAXCQ5TGI0 409 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 WSCD1Q658N2 575 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 RAET1GQ6H3X3 334 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 SPOCD1Q6ZMY3 1216 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 METTL16Q86W50 562 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 SNX32Q86XE0 403 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 PHF13Q86YI8 300 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 DEFB106AQ8N104 65 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 GRIN3AQ8TCU5 1115 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 USP7Q93009 1102 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 KCNK16Q96T55 309 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CPNE1Q99829 537 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 MRPL1Q9BYD6 325 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TTYH1Q9H313 450 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TMEM216Q9P0N5 145 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 SNX6Q9UNH7 406 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 NEU2Q9Y3R4 380 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3DA0A087WVF3 549 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3IA0A087WXS9 549 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3EA0A087X179 549 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3KA0A087X1G2 549 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3FA6NER0 549 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3LB9A6J9 549 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CLDN4O14493 209 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TSPAN3O60637 253 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 UBXN7O94888 489 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 GUCA1CO95843 209 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TNFP01375 233 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 IL1BP01584 269 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CYP1A2P05177 515 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 EIF2S1P05198 315 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3HP0C7X1 549 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 KCNE1P15382 129 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 YBX3P16989 372 aaKnown RBP eCLIP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 NCF2P19878 526 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 ATP5A1P25705 553 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CMPK1P30085 196 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 PRIM2P49643 509 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 SPIDRQ14159 915 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 NTRK3Q16288 839 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 PCSK7Q16549 785 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CBWD3Q5JTY5 395 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CBWD5Q5RIA9 395 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 VARS2Q5ST30 1063 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 AGBL2Q5U5Z8 902 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3GQ6DHY5 549 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3CQ6IPX1 549 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CYP20A1Q6UW02 462 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 C17orf99Q6UX52 265 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 KRT73Q86Y46 540 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 DNAAF5Q86Y56 855 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 SLC13A5Q86YT5 568 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CAMK1DQ8IU85 385 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TBC1D3Q8IZP1 549 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 SLC25A41Q8N5S1 370 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CAMKK1Q8N5S9 505 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 PCDH20Q8N6Y1 951 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 HTR3CQ8WXA8 447 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 DDX1Q92499 740 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 BHMTQ93088 406 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CCM2Q9BSQ5 444 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 DESI2Q9BSY9 194 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 HEMGNQ9BXL5 484 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 ZDHHC6Q9H6R6 413 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 EXO5Q9H790 373 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 MIEF1Q9NQG6 463 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 SUCOQ9UBS9 1254 aaKnown RBP4.7□□□□□ -1.66
CCNL1-215ENST00000474539 TMCC3Q9ULS5 477 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 PHTF1Q9UMS5 762 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 ACOT9Q9Y305 439 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 PCDHB3Q9Y5E6 796 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 CAPN7Q9Y6W3 813 aa4.7□□□□□ -1.66
CCNL1-215ENST00000474539 ADGRA3Q8IWK6 1321 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 NPHP3-ACAD11A0A0J9YXS1 232 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 FAM47DPA6NHR8 397 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 TTC36A6NLP5 189 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 PPP1R3GB7ZBB8 358 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 F8VZ95 297 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 H7C0S8 307 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 APOC4-APOC2K7ER74 178 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 INPPL1O15357 1258 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 AKAP8O43823 692 aaKnown RBP4.69□□□□□ -1.66
CCNL1-215ENST00000474539 ZNF623O75123 536 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 APBB3O95704 486 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 APOC2P02655 101 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 ZNF30P17039 623 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 LPOP22079 712 aaPredicted RBP4.69□□□□□ -1.66
CCNL1-215ENST00000474539 AVPR1BP47901 424 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 TRPC1P48995 793 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 CSE1LP55060 971 aaKnown RBP4.69□□□□□ -1.66
CCNL1-215ENST00000474539 GFPT1Q06210 699 aaPredicted RBP4.69□□□□□ -1.66
CCNL1-215ENST00000474539 DMWDQ09019 674 aa4.69□□□□□ -1.66
CCNL1-215ENST00000474539 CSTF3Q12996 717 aaKnown RBP4.69□□□□□ -1.66
CCNL1-215ENST00000474539 NAA30Q147X3 362 aaPredicted RBP4.69□□□□□ -1.66
CCNL1-215ENST00000474539 LONRF1Q17RB8 773 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms