RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 PLXND1Q9Y4D7 1925 aa8.52□□□□□ -1.04
CNN3-205ENST00000474409 A0A0D9SEW6 157 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 OTOL1A6NHN0 477 aaPredicted RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 ARNTLO00327 626 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 MTSS1O43312 755 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 TULP3O75386 442 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 SLU7O95391 586 aaKnown RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 IFNB1P01574 187 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 ITGAVP06756 1048 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 VAV1P15498 845 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 MZF1P28698 734 aaPredicted RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 RBL1P28749 1068 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 GJA4P35212 333 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 ACTN2P35609 894 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 COILP38432 576 aaPredicted RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 KCNJ1P48048 391 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 SOX9P48436 509 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 DR1Q01658 176 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 LMNB2Q03252 620 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 ZNF33AQ06730 810 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 IL10RBQ08334 325 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 SERINC3Q13530 473 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 TDGQ13569 410 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 SLC12A1Q13621 1099 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 DHX34Q14147 1143 aaKnown RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 DMC1Q14565 340 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 ZNF235Q14590 738 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 PRKD1Q15139 912 aaPredicted RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 PPP1R7Q15435 360 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 OASLQ15646 514 aaKnown RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 PLEKHG6Q3KR16 790 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 FUT11Q495W5 492 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 PREPLQ4J6C6 727 aaPredicted RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 PITRM1Q5JRX3 1037 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 TEX35Q5T0J7 233 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 RNF43Q68DV7 783 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 DRICH1Q6PGQ1 229 aaPredicted RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 ARHGAP36Q6ZRI8 547 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 LRRC49Q8IUZ0 686 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 CCDC26Q8TAB7 109 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 HTR3CQ8WXA8 447 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 ARHGEF2Q92974 986 aaKnown RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 NKD2Q969F2 451 aaPredicted RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 CIPCQ9C0C6 399 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 HAUS2Q9NVX0 235 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 UBA2Q9UBT2 640 aaPredicted RBP8.52□□□□□ -1.05
CNN3-205ENST00000474409 VPS51Q9UID3 782 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 SLC25A13Q9UJS0 675 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 TTLL3Q9Y4R7 772 aa8.52□□□□□ -1.05
CNN3-205ENST00000474409 BCLAF3A2AJT9 711 aaKnown RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 ZSCAN5CA6NGD5 496 aaPredicted RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 KCNK1O00180 336 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 RIOK3O14730 519 aaKnown RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 KDELR3O43731 214 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 NARSO43776 548 aaKnown RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 SNAP91O60641 907 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 PRAMEF11O60813 436 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 APODP05090 189 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 SRFP11831 508 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 POLR2EP19388 210 aaKnown RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 GLDCP23378 1020 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 CCNCP24863 283 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 CTHP32929 405 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 OPRD1P41143 372 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 EIF2DP41214 584 aaKnown RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 SLC6A11P48066 632 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 CLCN6P51797 869 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 GDF10P55107 478 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 GEMIN4P57678 1058 aaKnown RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 SULT2A1Q06520 285 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 GEN1Q17RS7 908 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 GAB4Q2WGN9 574 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 TMCO4Q5TGY1 634 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 MBLAC2Q68D91 279 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 RETSATQ6NUM9 610 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 TTC27Q6P3X3 843 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 NUDT18Q6ZVK8 323 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 APCDD1Q8J025 514 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 BBS5Q8N3I7 341 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 SLC44A3Q8N4M1 653 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 ALLCQ8N6M5 410 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.51□□□□□ -1.05
CNN3-205ENST00000474409 TERB1Q8NA31 727 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 ATL2Q8NHH9 583 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 USP33Q8TEY7 942 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 UCMAQ8WVF2 138 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 ATXN2LQ8WWM7 1075 aaKnown RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 EXOC4Q96A65 974 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 ACDQ96AP0 544 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 PNKPQ96T60 521 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 FEM1AQ9BSK4 669 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 CINPQ9BW66 212 aaPredicted RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 ACE2Q9BYF1 805 aaPredicted RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 CEP41Q9BYV8 373 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 C10orf88Q9H8K7 445 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 KLHL8Q9P2G9 620 aaPredicted RBP8.51□□□□□ -1.05
CNN3-205ENST00000474409 PCYOX1Q9UHG3 505 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 AMACRQ9UHK6 382 aa8.51□□□□□ -1.05
CNN3-205ENST00000474409 FEZ2Q9UHY8 353 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms