RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CNGA4Q8IV77 575 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 SH2D3CQ8N5H7 860 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 OR8D1Q8WZ84 308 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 PTPRN2Q92932 1015 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 CCDC42Q96M95 316 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 NUP85Q9BW27 656 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 TRIM7Q9C029 511 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 DHX35Q9H5Z1 703 aaKnown RBP14.56□□□□□ -0.08
VAMP4-203ENST00000474047 TMEM248Q9NWD8 314 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 AP4E1Q9UPM8 1137 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 DOCK4Q8N1I0 1966 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 MUC22E2RYF6 1773 aaPredicted RBP14.56□□□□□ -0.08
VAMP4-203ENST00000474047 CEP192Q8TEP8 1941 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 AKR1B15C9JRZ8 316 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 DAPK3O43293 454 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ATP9BO43861 1147 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 RAMP2O60895 175 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 MFAP3LO75121 409 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 VAV1P15498 845 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ITPKAP23677 461 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 SLC8A1P32418 973 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 RECQLP46063 649 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 PSMD8P48556 350 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 VASPP50552 380 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 GALCP54803 685 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 TPI1P60174 286 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 GFPT1Q06210 699 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ACAP1Q15027 740 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 POLD3Q15054 466 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 CST6Q15828 149 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ERMARDQ5T6L9 678 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 LINGO4Q6UY18 593 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 PSMB7Q99436 277 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 BTBD1Q9H0C5 482 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 MAGEH1Q9H213 219 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 PABPC3Q9H361 631 aaKnown RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ABHD10Q9NUJ1 306 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 GPATCH2LQ9NWQ4 482 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 FBXL12Q9NXK8 326 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 DONSONQ9NYP3 566 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 IP6K2Q9UHH9 426 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 CDV3Q9UKY7 258 aaKnown RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 GVINP1Q7Z2Y8 2422 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 NUP205Q92621 2012 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 MID1O15344 667 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ADH1BP00325 375 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 CFIP05156 583 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 MIPP30301 263 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 SSR1P43307 286 aaKnown RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ID4P47928 161 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 DNA2P51530 1060 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 SLC20A2Q08357 652 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 PIGHQ14442 188 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 PLA2G2CQ5R387 149 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 FAM46CQ5VWP2 391 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 Q6ZVU0 165 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 RABEPKQ7Z6M1 372 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 CADM4Q8NFZ8 388 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 CTNNBL1Q8WYA6 563 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 SNX19Q92543 992 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ZNF419Q96HQ0 510 aaPredicted RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 NUSAP1Q9BXS6 441 aaKnown RBP14.55□□□□□ -0.08
VAMP4-203ENST00000474047 RBSNQ9H1K0 784 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ANAPC7Q9UJX3 599 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 HS3ST2Q9Y278 367 aa14.55□□□□□ -0.08
VAMP4-203ENST00000474047 ATXN2Q99700 1313 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 A0A1W2PP55 124 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 SSU72P8A0A1W2PR75 194 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 FAM47DPA6NHR8 397 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 EIF3CLB5ME19 914 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 MYO1FO00160 1098 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 EEF2KO00418 725 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 FGF10O15520 208 aaPredicted RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 RNASEH2AO75792 299 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 MT-CO1P00395 513 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 IGLV3-19P01714 112 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 CYP1A2P05177 515 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 SRCP12931 536 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 GNSP15586 552 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 C5AR1P21730 350 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 GLDCP23378 1020 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 HTR7P34969 479 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 CLCN6P51797 869 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 GEMIN4P57678 1058 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 ZNF252P-AS1Q0IIN9 211 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 SLC18A3Q16572 532 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 RSPO4Q2I0M5 234 aaPredicted RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 TRIM61Q5EBN2 209 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 PPP6R3Q5H9R7 873 aaPredicted RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 TCEAL6Q6IPX3 200 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 USP30Q70CQ3 517 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 NLRP14Q86W24 1093 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 SLC41A1Q8IVJ1 513 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 RTL3Q8N8U3 475 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 CEP76Q8TAP6 659 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 FRS2Q8WU20 508 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 ARHGEF2Q92974 986 aaKnown RBP14.54□□□□□ -0.08
VAMP4-203ENST00000474047 TCEAL3Q969E4 200 aa14.54□□□□□ -0.08
VAMP4-203ENST00000474047 FAM129BQ96TA1 746 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms