RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TCEAL8Q8IYN2 117 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 FIBCD1Q8N539 461 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 OVCA2Q8WZ82 227 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 PSMG2Q969U7 264 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 CENPTQ96BT3 561 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 CCT8L2Q96SF2 557 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 CYP2S1Q96SQ9 504 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 ZBED2Q9BTP6 218 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 PPCSQ9HAB8 311 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 GLOD4Q9HC38 313 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 CASS4Q9NQ75 786 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 ACTL7BQ9Y614 415 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 CHD9Q3L8U1 2897 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 GMNCA6NCL1 334 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 NRG2O14511 850 aaPredicted RBP18.37■□□□□ 0.53
VARS2-206ENST00000473916 NDUFAB1O14561 156 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 STC2O76061 302 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 SYN1P17600 705 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 KRT4P19013 534 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 PPM1AP35813 382 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 CCT5P48643 541 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 CRYMQ14894 314 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 DNAAF3Q8N9W5 541 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 OR52K2Q8NGK3 314 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 TRMT2BQ96GJ1 504 aaKnown RBP18.37■□□□□ 0.53
VARS2-206ENST00000473916 PRICKLE1Q96MT3 831 aaPredicted RBP18.37■□□□□ 0.53
VARS2-206ENST00000473916 C12orf65Q9H3J6 166 aaKnown RBP18.37■□□□□ 0.53
VARS2-206ENST00000473916 RANBP2P49792 3224 aaKnown RBP18.37■□□□□ 0.53
VARS2-206ENST00000473916 TTC24A2A3L6 582 aaPredicted RBP18.36■□□□□ 0.53
VARS2-206ENST00000473916 FAM159BA6NKW6 160 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 TGM5O43548 720 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 CACNG3O60359 315 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 ACSL4O60488 711 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 OAS1P00973 400 aaKnown RBP18.36■□□□□ 0.53
VARS2-206ENST00000473916 INHBAP08476 426 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 F7P08709 466 aaPredicted RBP18.36■□□□□ 0.53
VARS2-206ENST00000473916 OR1E1P30953 314 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 CORO1AP31146 461 aaKnown RBP18.36■□□□□ 0.53
VARS2-206ENST00000473916 NDST2P52849 883 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 RPS24P62847 133 aaKnown RBP18.36■□□□□ 0.53
VARS2-206ENST00000473916 FPGSQ05932 587 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 NR1H3Q13133 447 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 VEPH1Q14D04 833 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 TMEM240Q5SV17 173 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 ZNF354CQ86Y25 554 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 SERAC1Q96JX3 654 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 FCRL3Q96P31 734 aaPredicted RBP18.36■□□□□ 0.53
VARS2-206ENST00000473916 CDK5RAP1Q96SZ6 601 aaKnown RBP18.36■□□□□ 0.53
VARS2-206ENST00000473916 MOCS1Q9NZB8 636 aa18.36■□□□□ 0.53
VARS2-206ENST00000473916 F5H5T6 163 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 ZNF189O75820 626 aaPredicted RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 CTSAP10619 480 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 PGAM1P18669 254 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 RPA3P35244 121 aaPredicted RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 KPNA1P52294 538 aaPredicted RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 WDR4P57081 412 aaKnown RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 MAXP61244 160 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 SLC10A7Q0GE19 358 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 PPIGQ13427 754 aaKnown RBP eCLIP18.35■□□□□ 0.531e-8■□□□□ 11
VARS2-206ENST00000473916 BMPR2Q13873 1038 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 KDELC2Q7Z4H8 507 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 TAX1BP1Q86VP1 789 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 LRRC6Q86X45 466 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 ZNF276Q8N554 614 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 IPMKQ8NFU5 416 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 ZNF473Q8WTR7 871 aaKnown RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 PABPC5Q96DU9 382 aaKnown RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 ZNF317Q96PQ6 595 aaPredicted RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 SMC6Q96SB8 1091 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 TRPC7Q9HCX4 862 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 ALG13Q9NP73 1137 aaKnown RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 TMEM51Q9NW97 253 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 FNIP2Q9P278 1114 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 CCDC78A2IDD5 438 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 ATP9BO43861 1147 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 HARS2P49590 506 aaKnown RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 EPHB3P54753 998 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 ZXDBP98169 803 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 SF3A3Q12874 501 aaKnown RBP eCLIP18.35■□□□□ 0.53
VARS2-206ENST00000473916 IHHQ14623 411 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 TIGD7Q6NT04 549 aaPredicted RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 KLHDC10Q6PID8 442 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 SLC26A11Q86WA9 606 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 C7orf61Q8IZ16 206 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 IL21Q9HBE4 155 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 RXFP1Q9HBX9 757 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 GRID1Q9ULK0 1009 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 ACTL7AQ9Y615 435 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 IKBKGQ9Y6K9 419 aa18.35■□□□□ 0.53
VARS2-206ENST00000473916 ZFP37Q9Y6Q3 630 aaPredicted RBP18.35■□□□□ 0.53
VARS2-206ENST00000473916 PDE4DIPQ5VU43 2346 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 A0A0D9SEW6 157 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 FAM47DPA6NHR8 397 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 TYROBPO43914 113 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 RAMP2O60895 175 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 PMPCBO75439 489 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 GJB3O75712 270 aa18.34■□□□□ 0.53
VARS2-206ENST00000473916 GSTA2P09210 222 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms