RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 WSB2Q9NYS7 404 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-210ENST00000473829 DNAI1Q9UI46 699 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 AP4E1Q9UPM8 1137 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 HS3ST2Q9Y278 367 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 ATXN2Q99700 1313 aaKnown RBP19.4■□□□□ 0.7
PTCD3-210ENST00000473829 SSU72P8A0A1W2PR75 194 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 TARSL2A2RTX5 802 aaKnown RBP19.39■□□□□ 0.69
PTCD3-210ENST00000473829 ZMPSTE24O75844 475 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 ACADMP11310 421 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 EPHB2P29323 1055 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 ACVRL1P37023 503 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 MAPKAPK2P49137 400 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 KRT83P78385 493 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 ARF5P84085 180 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 TCEAL6Q6IPX3 200 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 PRR23CQ6ZRP0 262 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 Q6ZVU0 165 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 CYP2U1Q7Z449 544 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 TCEAL3Q969E4 200 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 SPON2Q9BUD6 331 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 NOL6Q9H6R4 1146 aaKnown RBP19.39■□□□□ 0.69
PTCD3-210ENST00000473829 ATP13A1Q9HD20 1204 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 ZNHIT6Q9NWK9 470 aaKnown RBP19.39■□□□□ 0.69
PTCD3-210ENST00000473829 ACTL7AQ9Y615 435 aa19.39■□□□□ 0.69
PTCD3-210ENST00000473829 AKR1B15C9JRZ8 316 aaPredicted RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 CBX4O00257 560 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 SMAD6O43541 496 aaKnown RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 RNF8O76064 485 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 DNTTP04053 509 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 ITPKAP23677 461 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 IL1R2P27930 398 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 NNMTP40261 264 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 ZNF75DP51815 510 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 DNAH14Q0VDD8 3507 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 DLG2Q15700 870 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 ACCSLQ4AC99 568 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 LYSMD4Q5XG99 296 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 CNGA4Q8IV77 575 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 MMAAQ8IVH4 418 aaKnown RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 GPR161Q8N6U8 529 aaKnown RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 RTL3Q8N8U3 475 aaKnown RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 TC2NQ8N9U0 490 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 ARHGEF2Q92974 986 aaKnown RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 HSPA12BQ96MM6 686 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 KCTD15Q96SI1 283 aaPredicted RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 EPAS1Q99814 870 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 ACE2Q9BYF1 805 aaPredicted RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 PABPC3Q9H361 631 aaKnown RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 DEF6Q9H4E7 631 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 DHX35Q9H5Z1 703 aaKnown RBP19.38■□□□□ 0.69
PTCD3-210ENST00000473829 TMEM74BQ9NUR3 256 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 SPTLC3Q9NUV7 552 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 SERGEFQ9UGK8 458 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 ANAPC7Q9UJX3 599 aa19.38■□□□□ 0.69
PTCD3-210ENST00000473829 GON4LQ3T8J9 2241 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 PATE3B3GLJ2 98 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 MID1O15344 667 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 NDUFS2O75306 463 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 CD160O95971 181 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 ZNF806P0C7X5 589 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 ACSL1P33121 698 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 PSMD8P48556 350 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 METAP1P53582 386 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 ZBTB16Q05516 673 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 ZNF33AQ06730 810 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 ELAVL3Q14576 367 aaKnown RBP19.37■□□□□ 0.69
PTCD3-210ENST00000473829 CST6Q15828 149 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 SPDYCQ5MJ68 293 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 ERMARDQ5T6L9 678 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 CPNE8Q86YQ8 564 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 ATP11CQ8NB49 1132 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 PIGKQ92643 395 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 GPR174Q9BXC1 333 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 RETREG1Q9H6L5 497 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 NHEJ1Q9H9Q4 299 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-210ENST00000473829 VPS45Q9NRW7 570 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 RXFP3Q9NSD7 469 aa19.37■□□□□ 0.69
PTCD3-210ENST00000473829 CEP250Q9BV73 2442 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 PRPSAP2O60256 369 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 GDF9O60383 454 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 PCK1P35558 622 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 TPI1P60174 286 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 TSR1Q2NL82 804 aaKnown RBP19.36■□□□□ 0.69
PTCD3-210ENST00000473829 IL31Q6EBC2 164 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 TXNRD3NBQ6F5E7 133 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 AADATQ8N5Z0 425 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 NIPA2Q8N8Q9 360 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 ZNF564Q8TBZ8 553 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-210ENST00000473829 ZNF419Q96HQ0 510 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-210ENST00000473829 PILRBQ9UKJ0 227 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 SARDHQ9UL12 918 aa19.36■□□□□ 0.69
PTCD3-210ENST00000473829 A0A1W2PP55 124 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 WASH4PA8MWX3 477 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 AKR1B10O60218 316 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 BNIP3LO60238 219 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 RAMP2O60895 175 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 RNASEH1O60930 286 aaKnown RBP19.35■□□□□ 0.69
PTCD3-210ENST00000473829 ZNF821O75541 412 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-210ENST00000473829 GOT1P17174 413 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 OXTRP30559 389 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms