RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TRAPPC9Q96Q05 1148 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 EIF3CQ99613 913 aaKnown RBP2.59□□□□□ -1.99
CALD1-216ENST00000473714 RAD9AQ99638 391 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 C17orf80Q9BSJ5 609 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 KATNAL1Q9BW62 490 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 CPEB1Q9BZB8 566 aaKnown RBP2.59□□□□□ -1.99
CALD1-216ENST00000473714 ZCWPW1Q9H0M4 648 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 NRDE2Q9H7Z3 1164 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 SMURF2Q9HAU4 748 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 SEMA4GQ9NTN9 838 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 PLA2G3Q9NZ20 509 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 DLGAP2Q9P1A6 1054 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 SLC23A1Q9UHI7 598 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 SLC13A4Q9UKG4 626 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 FBXO4Q9UKT5 387 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 ARHGAP26Q9UNA1 814 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 CLCA2Q9UQC9 943 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 CDYLQ9Y232 598 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 TBC1D30Q9Y2I9 924 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 USP15Q9Y4E8 981 aaPredicted RBP2.59□□□□□ -1.99
CALD1-216ENST00000473714 RAD54BQ9Y620 910 aa2.59□□□□□ -1.99
CALD1-216ENST00000473714 MAST3O60307 1309 aa2.59□□□□□ -2
CALD1-216ENST00000473714 ARHGEF17Q96PE2 2063 aaPredicted RBP2.59□□□□□ -2
CALD1-216ENST00000473714 ABCA2Q9BZC7 2435 aa2.59□□□□□ -2
CALD1-216ENST00000473714 TANC1Q9C0D5 1861 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MYH3P11055 1940 aa2.58□□□□□ -2
CALD1-216ENST00000473714 SPG11Q96JI7 2443 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MICAL3Q7RTP6 2002 aa2.58□□□□□ -2
CALD1-216ENST00000473714 DOCK8Q8NF50 2099 aa2.58□□□□□ -2
CALD1-216ENST00000473714 A0A087WWL8 130 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.58□□□□□ -2
CALD1-216ENST00000473714 KRTAP23-1A1A580 65 aa2.58□□□□□ -2
CALD1-216ENST00000473714 TBKBP1A7MCY6 615 aa2.58□□□□□ -2
CALD1-216ENST00000473714 CAPN14A8MX76 684 aa2.58□□□□□ -2
CALD1-216ENST00000473714 IPO5O00410 1097 aaKnown RBP2.58□□□□□ -2
CALD1-216ENST00000473714 TOR1BO14657 336 aa2.58□□□□□ -2
CALD1-216ENST00000473714 DNPH1O43598 174 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MFAP3LO75121 409 aa2.58□□□□□ -2
CALD1-216ENST00000473714 SOAT2O75908 522 aa2.58□□□□□ -2
CALD1-216ENST00000473714 ACTL6BO94805 426 aa2.58□□□□□ -2
CALD1-216ENST00000473714 VIPP01282 170 aa2.58□□□□□ -2
CALD1-216ENST00000473714 CHRM3P20309 590 aa2.58□□□□□ -2
CALD1-216ENST00000473714 ITGALP20701 1170 aa2.58□□□□□ -2
CALD1-216ENST00000473714 HOXA7P31268 230 aaPredicted RBP2.58□□□□□ -2
CALD1-216ENST00000473714 RFC2P35250 354 aa2.58□□□□□ -2
CALD1-216ENST00000473714 PTGS2P35354 604 aa2.58□□□□□ -2
CALD1-216ENST00000473714 PXNP49023 591 aaPredicted RBP2.58□□□□□ -2
CALD1-216ENST00000473714 NDUFV1P49821 464 aa2.58□□□□□ -2
CALD1-216ENST00000473714 CCT4P50991 539 aaKnown RBP2.58□□□□□ -2
CALD1-216ENST00000473714 AP2B1P63010 937 aa2.58□□□□□ -2
CALD1-216ENST00000473714 HTRA4P83105 476 aaPredicted RBP2.58□□□□□ -2
CALD1-216ENST00000473714 FOXO1Q12778 655 aa2.58□□□□□ -2
CALD1-216ENST00000473714 GPS1Q13098 491 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MAPK7Q13164 816 aa2.58□□□□□ -2
CALD1-216ENST00000473714 GRB14Q14449 540 aa2.58□□□□□ -2
CALD1-216ENST00000473714 FAM214AQ32MH5 1076 aa2.58□□□□□ -2
CALD1-216ENST00000473714 EPC2Q52LR7 807 aa2.58□□□□□ -2
CALD1-216ENST00000473714 ZNF569Q5MCW4 686 aa2.58□□□□□ -2
CALD1-216ENST00000473714 FBXO47Q5MNV8 452 aa2.58□□□□□ -2
CALD1-216ENST00000473714 INTS11Q5TA45 600 aaKnown RBP2.58□□□□□ -2
CALD1-216ENST00000473714 VPS53Q5VIR6 699 aa2.58□□□□□ -2
CALD1-216ENST00000473714 PLAG1Q6DJT9 500 aa2.58□□□□□ -2
CALD1-216ENST00000473714 ITPRIPL1Q6GPH6 555 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MRNIPQ6NTE8 343 aa2.58□□□□□ -2
CALD1-216ENST00000473714 RETSATQ6NUM9 610 aa2.58□□□□□ -2
CALD1-216ENST00000473714 FAM180BQ6P0A1 224 aa2.58□□□□□ -2
CALD1-216ENST00000473714 FAM111BQ6SJ93 734 aa2.58□□□□□ -2
CALD1-216ENST00000473714 RRAGAQ7L523 313 aa2.58□□□□□ -2
CALD1-216ENST00000473714 DEFB128Q7Z7B8 93 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MOGAT3Q86VF5 341 aa2.58□□□□□ -2
CALD1-216ENST00000473714 HEATR4Q86WZ0 1026 aa2.58□□□□□ -2
CALD1-216ENST00000473714 NRSN1Q8IZ57 195 aa2.58□□□□□ -2
CALD1-216ENST00000473714 NME8Q8N427 588 aa2.58□□□□□ -2
CALD1-216ENST00000473714 TMEM57Q8N5G2 664 aa2.58□□□□□ -2
CALD1-216ENST00000473714 LILRA3Q8N6C8 439 aaPredicted RBP2.58□□□□□ -2
CALD1-216ENST00000473714 VGLL2Q8N8G2 317 aa2.58□□□□□ -2
CALD1-216ENST00000473714 ABHD5Q8WTS1 349 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MAML1Q92585 1016 aa2.58□□□□□ -2
CALD1-216ENST00000473714 RABGGTAQ92696 567 aa2.58□□□□□ -2
CALD1-216ENST00000473714 NELL1Q92832 810 aa2.58□□□□□ -2
CALD1-216ENST00000473714 HAS1Q92839 578 aa2.58□□□□□ -2
CALD1-216ENST00000473714 HVCN1Q96D96 273 aa2.58□□□□□ -2
CALD1-216ENST00000473714 COG8Q96MW5 612 aa2.58□□□□□ -2
CALD1-216ENST00000473714 TIGD1Q96MW7 591 aa2.58□□□□□ -2
CALD1-216ENST00000473714 NEUROD6Q96NK8 337 aa2.58□□□□□ -2
CALD1-216ENST00000473714 SLC46A1Q96NT5 459 aa2.58□□□□□ -2
CALD1-216ENST00000473714 THUMPD2Q9BTF0 503 aaKnown RBP2.58□□□□□ -2
CALD1-216ENST00000473714 NDC1Q9BTX1 674 aa2.58□□□□□ -2
CALD1-216ENST00000473714 SEZ6LQ9BYH1 1024 aa2.58□□□□□ -2
CALD1-216ENST00000473714 DPH1Q9BZG8 443 aa2.58□□□□□ -2
CALD1-216ENST00000473714 LMAN2LQ9H0V9 348 aa2.58□□□□□ -2
CALD1-216ENST00000473714 ELAC1Q9H777 363 aaKnown RBP2.58□□□□□ -2
CALD1-216ENST00000473714 NOD2Q9HC29 1040 aa2.58□□□□□ -2
CALD1-216ENST00000473714 MSL2Q9HCI7 577 aa2.58□□□□□ -2
CALD1-216ENST00000473714 ZBTB26Q9HCK0 441 aa2.58□□□□□ -2
CALD1-216ENST00000473714 CD209Q9NNX6 404 aa2.58□□□□□ -2
CALD1-216ENST00000473714 HELLSQ9NRZ9 838 aa2.58□□□□□ -2
CALD1-216ENST00000473714 IGSF9Q9P2J2 1179 aa2.58□□□□□ -2
CALD1-216ENST00000473714 PDP2Q9P2J9 529 aa2.58□□□□□ -2
CALD1-216ENST00000473714 DBF4Q9UBU7 674 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms