RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 DUSP10Q9Y6W6 482 aa9.35□□□□□ -0.91
SMC4-214ENST00000472991 SPAG17Q6Q759 2223 aa9.35□□□□□ -0.91
SMC4-214ENST00000472991 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 MACROD2A1Z1Q3 448 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 DRGXA6NNA5 263 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 BTNL10A8MVZ5 291 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 K7EQS6 105 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 BUB1BO60566 1050 aaPredicted RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 CLDN11O75508 207 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 RHOCP08134 193 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 CELA2BP08218 269 aaPredicted RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 RARAP10276 462 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 EPHB2P29323 1055 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 L1CAMP32004 1257 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 CSKP41240 450 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 ARHGAP25P42331 645 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 NUMBP49757 651 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 NAP1L1P55209 391 aaKnown RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 TPI1P60174 286 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 KIF5AQ12840 1032 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 ZNF177Q13360 481 aaPredicted RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 HADHQ16836 314 aaKnown RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 FUT11Q495W5 492 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 FBXO43Q4G163 708 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 C2orf27AQ580R0 203 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 PPP6R3Q5H9R7 873 aaPredicted RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 TMEM215Q68D42 235 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 CXorf57Q6NSI4 855 aaKnown RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 PKN3Q6P5Z2 889 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMC4-214ENST00000472991 ZNF557Q8N988 423 aaPredicted RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 OR52K2Q8NGK3 314 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 RPLP0P6Q8NHW5 317 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 TPCN2Q8NHX9 752 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 FIBINQ8TAL6 211 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 WFIKKN2Q8TEU8 576 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 CLDN23Q96B33 292 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 LMLNQ96KR4 655 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 LRFN3Q9BTN0 628 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 CIPCQ9C0C6 399 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 CHRDQ9H2X0 955 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 KCNF1Q9H3M0 494 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 ZDHHC4Q9NPG8 344 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMC4-214ENST00000472991 KLHL11Q9NVR0 708 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 DLGAP2Q9P1A6 1054 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 PPARGC1AQ9UBK2 798 aaKnown RBP9.34□□□□□ -0.91
SMC4-214ENST00000472991 ZNF212Q9UDV6 495 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 HYOU1Q9Y4L1 999 aa9.34□□□□□ -0.91
SMC4-214ENST00000472991 A0A0A0MRY4 1105 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 EEF2KO00418 725 aaKnown RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 SPOPO43791 374 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 MOCS3O95396 460 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 CCDC175P0C221 793 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 TNNT1P13805 278 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 GOT1P17174 413 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 COMTP21964 271 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 MZF1P28698 734 aaPredicted RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 AVPR2P30518 371 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 OR1E1P30953 314 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 HOXC13P31276 330 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 SLC1A1P43005 524 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 MAGEA9P43362 315 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 TNFRSF4P43489 277 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 KIR2DL1P43626 348 aaPredicted RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 RPS9P46781 194 aaKnown RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 CDH6P55285 790 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 CCDC173Q0VFZ6 552 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 DPYSL2Q16555 572 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 PLEKHG6Q3KR16 790 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 ATP13A4Q4VNC1 1196 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 BOLA3Q53S33 107 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 PITRM1Q5JRX3 1037 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 EMC10Q5UCC4 262 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 EGFLAMQ63HQ2 1017 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 MBLAC2Q68D91 279 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 C11orf63Q6NUN7 778 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 KIAA0907Q7Z7F0 614 aaPredicted RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 DAAM2Q86T65 1068 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 NLRP14Q86W24 1093 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 PSTKQ8IV42 348 aaKnown RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 AHI1Q8N157 1196 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 SYNPOQ8N3V7 929 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 ZNF513Q8N8E2 541 aaPredicted RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 TEKT4Q8WW24 435 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 SORCS1Q8WY21 1168 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 ZNF830Q96NB3 372 aaPredicted RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 PCDH18Q9HCL0 1135 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 NDFIP2Q9NV92 336 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 TMEM248Q9NWD8 314 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 KIAA1522Q9P206 1035 aaPredicted RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 INTS6Q9UL03 887 aaKnown RBP9.33□□□□□ -0.92
SMC4-214ENST00000472991 HCN2Q9UL51 889 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 TBC1D30Q9Y2I9 924 aa9.33□□□□□ -0.92
SMC4-214ENST00000472991 H3BRJ5 948 aa9.32□□□□□ -0.92
SMC4-214ENST00000472991 FGF10O15520 208 aaPredicted RBP9.32□□□□□ -0.92
SMC4-214ENST00000472991 KRT86O43790 486 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms