RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 NOL6Q9H6R4 1146 aaKnown RBP20.45■□□□□ 0.86
SF1-213ENST00000472725 FBRSQ9HAH7 460 aa20.45■□□□□ 0.86
SF1-213ENST00000472725 PRMT8Q9NR22 394 aaPredicted RBP20.45■□□□□ 0.86
SF1-213ENST00000472725 VPS51Q9UID3 782 aa20.45■□□□□ 0.86
SF1-213ENST00000472725 CAPN6Q9Y6Q1 641 aa20.45■□□□□ 0.86
SF1-213ENST00000472725 NUP205Q92621 2012 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 GOLGA6L9A6NEM1 432 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 RASA4BC9J798 803 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 RASA4O43374 803 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 KDELR3O43731 214 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 ADAM23O75077 832 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 CETN2P41208 172 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 RWDD2BP57060 319 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 SERINC3Q13530 473 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 STARD3Q14849 445 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 PAFAH1B3Q15102 231 aaKnown RBP20.44■□□□□ 0.86
SF1-213ENST00000472725 CRY1Q16526 586 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 FNDC3BQ53EP0 1204 aaKnown RBP20.44■□□□□ 0.86
SF1-213ENST00000472725 PKN3Q6P5Z2 889 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 OR7D4Q8NG98 312 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 CYB5D2Q8WUJ1 264 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 CASKIN2Q8WXE0 1202 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 SORCS1Q8WY21 1168 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 MYO19Q96H55 970 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 MRGPRX3Q96LB0 322 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 SPON2Q9BUD6 331 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 MAK16Q9BXY0 300 aaKnown RBP20.44■□□□□ 0.86
SF1-213ENST00000472725 POLMQ9NP87 494 aaPredicted RBP20.44■□□□□ 0.86
SF1-213ENST00000472725 EFR3BQ9Y2G0 817 aa20.44■□□□□ 0.86
SF1-213ENST00000472725 ZNF318Q5VUA4 2279 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 CKAP5Q14008 2032 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 SGK1O00141 431 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 GALR2O43603 387 aaPredicted RBP20.43■□□□□ 0.86
SF1-213ENST00000472725 ATP9BO43861 1147 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 ZMPSTE24O75844 475 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 TNNT1P13805 278 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 HOXB2P14652 356 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 IL12RB1P42701 662 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 PEX5P50542 639 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 MMRN1Q13201 1228 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 TFDP2Q14188 446 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 PPP2R5EQ16537 467 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 CCDC33Q8N5R6 958 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 PCDH19Q8TAB3 1148 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 ACOX2Q99424 681 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 FAM126AQ9BYI3 521 aaPredicted RBP20.43■□□□□ 0.86
SF1-213ENST00000472725 KLHL11Q9NVR0 708 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 CACNA2D2Q9NY47 1150 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 RAD54BQ9Y620 910 aa20.43■□□□□ 0.86
SF1-213ENST00000472725 CCDC163A0A0D9SF12 145 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 TARSL2A2RTX5 802 aaKnown RBP20.42■□□□□ 0.86
SF1-213ENST00000472725 CBX4O00257 560 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 ZBTB24O43167 697 aaPredicted RBP20.42■□□□□ 0.86
SF1-213ENST00000472725 SYNCRIPO60506 623 aaKnown RBP20.42■□□□□ 0.86
SF1-213ENST00000472725 ALDH1A2O94788 518 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 ACVRL1P37023 503 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 CDKN2BP42772 138 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 HNRNPA1L2Q32P51 320 aaKnown RBP20.42■□□□□ 0.86
SF1-213ENST00000472725 ZNF528Q3MIS6 628 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 TFDP3Q5H9I0 405 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 SLC9A4Q6AI14 798 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 ARHGAP12Q8IWW6 846 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 REXO1L1PQ8IX06 675 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 SH2D3CQ8N5H7 860 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.42■□□□□ 0.86
SF1-213ENST00000472725 KRT35Q92764 455 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 HMCESQ96FZ2 354 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 HES6Q96HZ4 224 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 CEP44Q9C0F1 390 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 SLC39A8Q9C0K1 460 aa20.42■□□□□ 0.86
SF1-213ENST00000472725 EDDM13A0A1B0GTR0 161 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 ANTXRLA6NF34 631 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 SNAP91O60641 907 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 C7P10643 843 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 MSNP26038 577 aaKnown RBP20.41■□□□□ 0.86
SF1-213ENST00000472725 PTPN7P35236 360 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 CTSOP43234 321 aaPredicted RBP20.41■□□□□ 0.86
SF1-213ENST00000472725 NRLP54845 237 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 SATB1Q01826 763 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 CAMK2GQ13555 558 aaPredicted RBP20.41■□□□□ 0.86
SF1-213ENST00000472725 INO80DQ53TQ3 878 aaPredicted RBP20.41■□□□□ 0.86
SF1-213ENST00000472725 TMCO4Q5TGY1 634 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 NCBP2-AS2Q69YL0 99 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 MFSD7Q6UXD7 560 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 SPOCD1Q6ZMY3 1216 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 NPWQ8N729 165 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 PQLC3Q8N755 202 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 ISG20Q96AZ6 181 aaKnown RBP20.41■□□□□ 0.86
SF1-213ENST00000472725 RNF25Q96BH1 459 aaPredicted RBP20.41■□□□□ 0.86
SF1-213ENST00000472725 ETNK2Q9NVF9 386 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 EBF1Q9UH73 591 aa20.41■□□□□ 0.86
SF1-213ENST00000472725 A0A1W2PQF6 199 aa20.4■□□□□ 0.86
SF1-213ENST00000472725 APOL1O14791 398 aa20.4■□□□□ 0.86
SF1-213ENST00000472725 APBB3O95704 486 aa20.4■□□□□ 0.86
SF1-213ENST00000472725 FTCDO95954 541 aa20.4■□□□□ 0.86
SF1-213ENST00000472725 EPHX1P07099 455 aa20.4■□□□□ 0.86
SF1-213ENST00000472725 MX2P20592 715 aa20.4■□□□□ 0.86
SF1-213ENST00000472725 PRKCHP24723 683 aa20.4■□□□□ 0.86
SF1-213ENST00000472725 SERPINH1P50454 418 aaKnown RBP20.4■□□□□ 0.86
SF1-213ENST00000472725 PAPOLAP51003 745 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms