RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	HERC4	Q5GLZ8	1057 aa	Predicted RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	CFAP157	Q5JU67	520 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	ARHGAP17	Q68EM7	881 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	METTL2B	Q6P1Q9	378 aa	Known RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	GALNT18	Q6P9A2	607 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	METAP1D	Q6UB28	335 aa	Predicted RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	MFSD7	Q6UXD7	560 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	CRELD2	Q6UXH1	353 aa	Predicted RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	FJX1	Q86VR8	437 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	WDR5B	Q86VZ2	330 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	AMZ2	Q86W34	360 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	LDHD	Q86WU2	507 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	ARMC8	Q8IUR7	673 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	DIS3L2	Q8IYB7	885 aa	Known RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	CCDC105	Q8IYK2	499 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	OFCC1	Q8IZS5	231 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	EIF1AD	Q8N9N8	165 aa	Known RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	KDM1B	Q8NB78	822 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	TTL	Q8NG68	377 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	SCAMP5	Q8TAC9	235 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	ZNF461	Q8TAF7	563 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	CAGE1	Q8TC20	777 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	ENKUR	Q8TC29	256 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	FAM71B	Q8TC56	605 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	PTER	Q96BW5	349 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	NEIL1	Q96FI4	390 aa	Predicted RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	ZNF560	Q96MR9	790 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	DMRTA2	Q96SC8	542 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	INTS14	Q96SY0	518 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	SLC9A7	Q96T83	725 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	ZFYVE21	Q9BQ24	234 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	SELENOS	Q9BQE4	189 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	JPH2	Q9BR39	696 aa	Predicted RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	EIF2A	Q9BY44	585 aa	Known RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	SLC5A7	Q9GZV3	580 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	SLC25A18	Q9H1K4	315 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	SUGCT	Q9HAC7	445 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	C12orf10	Q9HB07	376 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	TUFT1	Q9NNX1	390 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	LTB4R2	Q9NPC1	389 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	C12orf4	Q9NQ89	552 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	ARHGEF38	Q9NXL2	777 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	PKD2L2	Q9NZM6	624 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	DCDC2	Q9UHG0	476 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	DSE	Q9UL01	958 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	MINPP1	Q9UNW1	487 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	LIPT1	Q9Y234	373 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	MAN2B2	Q9Y2E5	1009 aa		3.32	□□□□□ -1.88
TTC3-214	ENST00000472398	KIF7	Q2M1P5	1343 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398		A0A0A0MRY4	1105 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	TMEM120B	A0PK00	339 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	C5orf51	A6NDU8	294 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	GOLGA6L10	A6NI86	522 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	OR2AG2	A6NM03	316 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	OR6C76	A6NM76	312 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	ZNF716	A6NP11	495 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398		H3BUI4	141 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	HRK	O00198	91 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	ZNF197	O14709	1029 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	FPGT	O14772	594 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	DLX3	O60479	287 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	NDUFS6	O75380	124 aa	Known RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	SEMA3D	O95025	777 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	DLGAP3	O95886	979 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	EPHX1	P07099	455 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	UQCRFS1P1	P0C7P4	283 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	ZNF735	P0CB33	412 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	TCN1	P20061	433 aa	Predicted RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	AGXT	P21549	392 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	FGFR2	P21802	821 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	HNRNPA2B1	P22626	353 aa	Known RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	MAP4	P27816	1152 aa	Known RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	CASP3	P42574	277 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	HSPA13	P48723	471 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	MRPL12	P52815	198 aa	Known RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	ATP12A	P54707	1039 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	TUBA4A	P68366	448 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	RNF4	P78317	190 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	GFPT1	Q06210	699 aa	Predicted RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	HYAL2	Q12891	473 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	NOG	Q13253	232 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	PEX6	Q13608	980 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	THEM4	Q5T1C6	240 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	FAM69A	Q5T7M9	428 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	ATG16L1	Q676U5	607 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	CWF19L1	Q69YN2	538 aa	Known RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	CEP85	Q6P2H3	762 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	CNKSR3	Q6P9H4	555 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	PIK3AP1	Q6ZUJ8	805 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	UBE2R2	Q712K3	238 aa	Predicted RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	TRIL	Q7L0X0	811 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	KANSL1	Q7Z3B3	1105 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	ANKLE2	Q86XL3	938 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	DDIAS	Q8IXT1	998 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	ST13P4	Q8IZP2	240 aa	Predicted RBP	3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	TXLNB	Q8N3L3	684 aa		3.31	□□□□□ -1.88
TTC3-214	ENST00000472398	AOPEP	Q8N6M6	819 aa		3.31	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms