RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SYT12Q8IV01 421 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PARP8Q8N3A8 854 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RIBC1Q8N443 379 aaPredicted RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NKD1Q969G9 470 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TRNT1Q96Q11 434 aaKnown RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CEP44Q9C0F1 390 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SPATC1LQ9H0A9 340 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 EPS8L2Q9H6S3 715 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MRPL17Q9NRX2 175 aaKnown RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ABHD14A-ACY1A0A1B0GW23 586 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PSMD11O00231 422 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 UBDO15205 165 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 IDH2P48735 452 aaKnown RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RENBPP51606 427 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ARMC12Q5T9G4 340 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TMEM132CQ8N3T6 1108 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DGCR6LQ9BY27 220 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TBC1D13Q9NVG8 400 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 A0A0A6YYK5 440 aaPredicted RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SSU72P8A0A1W2PR75 194 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TMEM150BA6NC51 233 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ISM1B1AKI9 464 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PSTPIP1O43586 416 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 AMPD1P23109 780 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RPS12P25398 132 aaKnown RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 HSD17B3P37058 310 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RAD23AP54725 363 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CBWD6Q4V339 395 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KCNMB4Q86W47 210 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CENPIQ92674 756 aaPredicted RBP13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NSMCE2Q96MF7 247 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ACAT2Q9BWD1 397 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 STK39Q9UEW8 545 aa13.44□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SF3B1O75533 1304 aaKnown RBP eCLIP13.44□□□□□ -0.268e-6■■■■■ 107
NPHP3-ACAD11-201ENST00000471702 DOCK10Q96BY6 2186 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TFPIP10646 304 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PPIDQ08752 370 aaKnown RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PXMP2Q9NR77 195 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MAT2BQ9NZL9 334 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ARHGAP28Q9P2N2 729 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PNPLA7Q6ZV29 1317 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TP73O15350 636 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 VHLP40337 213 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SPOCD1Q6ZMY3 1216 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DTNBP1Q96EV8 351 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CDADC1Q9BWV3 514 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TKTL2Q9H0I9 626 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 INTS7Q9NVH2 962 aaKnown RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MORC2Q9Y6X9 1032 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SYNMO15061 1565 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 BHMG1C9JSJ3 638 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CYP2A6P11509 494 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CYP11B2P19099 503 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SLC1A6P48664 564 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 HK2P52789 917 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RCAN1P53805 252 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RGS8P57771 180 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 USP38Q8NB14 1042 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TESCQ96BS2 214 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KLQ9UEF7 1012 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PSME2Q9UL46 239 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 COG5Q9UP83 839 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 EIF4BP23588 611 aaKnown RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TLX1P31314 330 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 BST2Q10589 180 aaKnown RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MARK4Q96L34 752 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DCUN1D5Q9BTE7 237 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 RACGAP1Q9H0H5 632 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NRDE2Q9H7Z3 1164 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TIMM8BQ9Y5J9 83 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 EFCAB10A6NFE3 127 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PSIP1O75475 530 aaKnown RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 AXLP30530 894 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ABCG1P45844 678 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 STARP49675 285 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PSMD4P55036 377 aaKnown RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FASTKQ14296 549 aaKnown RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ATP13A4Q4VNC1 1196 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CXCL17Q6UXB2 119 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DENND1CQ8IV53 801 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MAGEC3Q8TD91 643 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SMARCD1Q96GM5 515 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FFAR3O14843 346 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GPR42O15529 346 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MGRN1O60291 552 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PDE5AO76074 875 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 MICAL2O94851 1124 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 COX7A2P14406 83 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KLRK1P26718 216 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NR1I3Q14994 352 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FSCN1Q16658 493 aaKnown RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CCNI2Q6ZMN8 369 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 GALNTL5Q7Z4T8 443 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TREML1Q86YW5 311 aa13.43□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SLC22A9Q8IVM8 553 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms