RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ZBTB16Q05516 673 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 MESDQ14696 234 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 DLG2Q15700 870 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 SMTNL2Q2TAL5 461 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 PARP15Q460N3 678 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 KCNT1Q5JUK3 1230 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 C9orf64Q5T6V5 341 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 IL31Q6EBC2 164 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 TXNRD3NBQ6F5E7 133 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 KIAA1324Q6UXG2 1013 aaKnown RBP15.64■□□□□ 0.09
SDC3-203ENST00000471567 RAD9BQ6WBX8 426 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 TMEM139Q8IV31 216 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 FRS2Q8WU20 508 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 HSPH1Q92598 858 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 PTPRN2Q92932 1015 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 ERLEC1Q96DZ1 483 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 RSPH9Q9H1X1 276 aaPredicted RBP15.64■□□□□ 0.09
SDC3-203ENST00000471567 NOL6Q9H6R4 1146 aaKnown RBP15.64■□□□□ 0.09
SDC3-203ENST00000471567 ITM2CQ9NQX7 267 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.64■□□□□ 0.09
SDC3-203ENST00000471567 CWC15Q9P013 229 aaKnown RBP15.64■□□□□ 0.09
SDC3-203ENST00000471567 HPCAL4Q9UM19 191 aa15.64■□□□□ 0.09
SDC3-203ENST00000471567 SMG5Q9UPR3 1016 aaKnown RBP15.64■□□□□ 0.09
SDC3-203ENST00000471567 KDELR3O43731 214 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 RNASEH1O60930 286 aaKnown RBP15.63■□□□□ 0.09
SDC3-203ENST00000471567 RHOBTB1O94844 696 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 SRCP12931 536 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 ERCC2P18074 760 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 ACVRL1P37023 503 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 SLC1A1P43005 524 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 NUMBP49757 651 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 NDST2P52849 883 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 GEMIN4P57678 1058 aaKnown RBP15.63■□□□□ 0.09
SDC3-203ENST00000471567 DPYSQ14117 519 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 ELAVL3Q14576 367 aaKnown RBP15.63■□□□□ 0.09
SDC3-203ENST00000471567 ACCSLQ4AC99 568 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 ZNF776Q68DI1 518 aaPredicted RBP15.63■□□□□ 0.09
SDC3-203ENST00000471567 LAIR1Q6GTX8 287 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 SLC36A4Q6YBV0 504 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 PRR23BQ6ZRT6 265 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 POLNQ7Z5Q5 900 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 ATP11CQ8NB49 1132 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 FAM71BQ8TC56 605 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 RLN3Q8WXF3 142 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 LOXL4Q96JB6 756 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 CALR3Q96L12 384 aaKnown RBP15.63■□□□□ 0.09
SDC3-203ENST00000471567 SLC6A17Q9H1V8 727 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 MTG2Q9H4K7 406 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 GRPEL1Q9HAV7 217 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 PCDH18Q9HCL0 1135 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 USP36Q9P275 1121 aaKnown RBP15.63■□□□□ 0.09
SDC3-203ENST00000471567 RCOR3Q9P2K3 495 aaPredicted RBP15.63■□□□□ 0.09
SDC3-203ENST00000471567 SCML1Q9UN30 329 aa15.63■□□□□ 0.09
SDC3-203ENST00000471567 EML5Q05BV3 1969 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 CHD5Q8TDI0 1954 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 GOLGA6L3A6NEY3 463 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 ZSCAN5CA6NGD5 496 aaPredicted RBP15.62■□□□□ 0.09
SDC3-203ENST00000471567 TMEM110-MUSTN1A8MSY1 372 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 RASA4BC9J798 803 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 DCLK1O15075 740 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 RASA4O43374 803 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 MT-CO1P00395 513 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 IGLV3-19P01714 112 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 ACADMP11310 421 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 GLDCP23378 1020 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 OXTRP30559 389 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 NOP2P46087 812 aaKnown RBP15.62■□□□□ 0.09
SDC3-203ENST00000471567 SERPINH1P50454 418 aaKnown RBP15.62■□□□□ 0.09
SDC3-203ENST00000471567 TAS2R40P59535 323 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 RPS14P62263 151 aaKnown RBP15.62■□□□□ 0.09
SDC3-203ENST00000471567 ARF5P84085 180 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 SFSWAPQ12872 951 aaKnown RBP15.62■□□□□ 0.09
SDC3-203ENST00000471567 KRT81Q14533 505 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 PDK2Q15119 407 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 ELF2Q15723 593 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 PLK5Q496M5 336 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 SPDYCQ5MJ68 293 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 ASCL5Q7RTU5 278 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 KBTBD6Q86V97 674 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 MAP7D3Q8IWC1 876 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 LZTR1Q8N653 840 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 TSC1Q92574 1164 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 FAM129BQ96TA1 746 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 CEP44Q9C0F1 390 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 DUSP15Q9H1R2 295 aaPredicted RBP15.62■□□□□ 0.09
SDC3-203ENST00000471567 LRRC19Q9H756 370 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 INVSQ9Y283 1065 aa15.62■□□□□ 0.09
SDC3-203ENST00000471567 IGHV1OR15-9A0A0B4J2B8 117 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 BTNL10A8MVZ5 291 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 ALOX15BO15296 676 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 MAP3K13O43283 966 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 ARSEP51690 589 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 CDH6P55285 790 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 SERINC3Q13530 473 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 LRRC38Q5VT99 294 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 AFMIDQ63HM1 303 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 PMS2CLQ68D20 193 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 LINGO4Q6UY18 593 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 DSG4Q86SJ6 1040 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 CPNE8Q86YQ8 564 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms