RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.26□□□□□ -0.13
SEMA3F-208ENST00000470737 PTPRQQ9UMZ3 2332 aa14.26□□□□□ -0.13
SEMA3F-208ENST00000470737 MCF2LO15068 1137 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 ATXN7O15265 892 aaPredicted RBP14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 ATP9BO43861 1147 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 BRINP1O60477 761 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 GLI1P08151 1106 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 METAP1P53582 386 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 PDCLQ13371 301 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 DLG2Q15700 870 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 EFHC1Q5JVL4 640 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 AGBL4Q5VU57 503 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 CXorf57Q6NSI4 855 aaKnown RBP14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 FBXL22Q6P050 247 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 Q6ZVU0 165 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 ENOSF1Q7L5Y1 443 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 KANSL1Q7Z3B3 1105 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 DEFB106AQ8N104 65 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 LSM14AQ8ND56 463 aaKnown RBP14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 NELFBQ8WX92 580 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 RFFLQ8WZ73 363 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 FAM81BQ96LP2 452 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 NOX5Q96PH1 765 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 FEM1AQ9BSK4 669 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 MUC3BQ9H195 1237 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 DYRK4Q9NR20 520 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 EVA1BQ9NVM1 165 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 VANGL2Q9ULK5 521 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 CTNND2Q9UQB3 1225 aa14.25□□□□□ -0.13
SEMA3F-208ENST00000470737 SIGLEC6O43699 453 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 HSF2BPO75031 334 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 CLDN11O75508 207 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 MT-CO3P00414 261 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 PRB1P04280 392 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 THEGLP0DJG4 465 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 ALPPL2P10696 532 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 AKT2P31751 481 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 USP8P40818 1118 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 SNX16P57768 344 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 KRT83P78385 493 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 INSM1Q01101 510 aaPredicted RBP14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 CENPCQ03188 943 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 CCDC173Q0VFZ6 552 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 ZNF211Q13398 564 aaPredicted RBP14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 PROX2Q3B8N5 592 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 TTI2Q6NXR4 508 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 FOXR2Q6PJQ5 311 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 KDM7AQ6ZMT4 941 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 GPR155Q7Z3F1 870 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 TRIM59Q8IWR1 403 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 SH2D3CQ8N5H7 860 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 MYOCQ99972 504 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 ASNSD1Q9NWL6 643 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 MAN1B1Q9UKM7 699 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 PPM1HQ9ULR3 514 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 CA5BQ9Y2D0 317 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 RAI2Q9Y5P3 530 aa14.24□□□□□ -0.13
SEMA3F-208ENST00000470737 TEX51A0A1B0GUA7 166 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 KPNA3O00505 521 aaPredicted RBP14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 SLC31A1O15431 190 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 GADD45BO75293 160 aaPredicted RBP14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 FGFR1OPO95684 399 aaKnown RBP14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 CDH4P55283 916 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 NME3Q13232 169 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 AUHQ13825 339 aaKnown RBP14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 TAF5Q15542 800 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 TBC1D25Q3MII6 688 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 OR6B2Q6IFH4 312 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 NEK5Q6P3R8 708 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 DCBLD1Q8N8Z6 715 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 ATP11CQ8NB49 1132 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 OR4C6Q8NH72 309 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 ALG14Q96F25 216 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 PPP1R13BQ96KQ4 1090 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 SLC2A13Q96QE2 648 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 LGMNQ99538 433 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 C2orf49Q9BVC5 232 aaPredicted RBP14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 CALN1Q9BXU9 219 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 KLHL11Q9NVR0 708 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 BPTFQ12830 3046 aa14.23□□□□□ -0.13
SEMA3F-208ENST00000470737 A0A1W2PQU0 124 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 TRIM38O00635 465 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 FFAR2O15552 330 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 GRAP2O75791 330 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 PCDH8O95206 1070 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 PRNPP04156 253 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 RHOCP08134 193 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 PRLRP16471 622 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 HNRNPA2B1P22626 353 aaKnown RBP14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 RECQLP46063 649 aaPredicted RBP14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 MARSP56192 900 aaKnown RBP14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 STX17P56962 302 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 CXADRP78310 365 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 PAK1Q13153 545 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 EIF4EBP2Q13542 120 aaPredicted RBP14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 ARHGAP44Q17R89 818 aa14.22□□□□□ -0.13
SEMA3F-208ENST00000470737 BROXQ5VW32 411 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms