RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SNHG28P0DPA3 235 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 SLC16A2P36021 539 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 POLD2P49005 469 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 ACTR2P61160 394 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 VWA5B1Q5TIE3 1220 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 ANKRD45Q5TZF3 282 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 LVRNQ6Q4G3 990 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 MOGAT3Q86VF5 341 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 TRIM63Q969Q1 353 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 WACQ9BTA9 647 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 IFT27Q9BW83 186 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 CADM1Q9BY67 442 aaKnown RBP4.3□□□□□ -1.72
BRCA2-202ENST00000470094 TWSG1Q9GZX9 223 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 ACAD9Q9H845 621 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 CHODLQ9H9P2 273 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 THAP1Q9NVV9 213 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 TBC1D14Q9P2M4 693 aa4.3□□□□□ -1.72
BRCA2-202ENST00000470094 MORC2Q9Y6X9 1032 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-202ENST00000470094 H0YGN5 161 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 KLKB1P03952 638 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 DHRS4L1P0CG22 281 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 TNNT1P13805 278 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 CDC25AP30304 524 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 P2RX3P56373 397 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 LINC00205P59089 165 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 FHL1Q13642 323 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 THOC5Q13769 683 aaKnown RBP4.29□□□□□ -1.72
BRCA2-202ENST00000470094 ZNF484Q5JVG2 852 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 PARM1Q6UWI2 310 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 GPSM1Q86YR5 675 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 BRSK2Q8IWQ3 736 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 NKAPQ8N5F7 415 aaKnown RBP4.29□□□□□ -1.72
BRCA2-202ENST00000470094 TMEM57Q8N5G2 664 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 C9orf106Q8NAJ2 232 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 CMASQ8NFW8 434 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-202ENST00000470094 SPPL3Q8TCT6 385 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 RBM17Q96I25 401 aaKnown RBP4.29□□□□□ -1.72
BRCA2-202ENST00000470094 FRG2BQ96QU4 278 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.29□□□□□ -1.72
BRCA2-202ENST00000470094 HIPK3Q9H422 1215 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 RMI1Q9H9A7 625 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 MAP6D1Q9H9H5 199 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 DERAQ9Y315 318 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 SLC4A4Q9Y6R1 1079 aa4.29□□□□□ -1.72
BRCA2-202ENST00000470094 TRBV5-7A0A0A0MS05 114 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-202ENST00000470094 METTL18O95568 372 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 FCGR2AP12318 317 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 RXRAP19793 462 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 AVPR2P30518 371 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 KCNJ4P48050 445 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 FOXG1P55316 489 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-202ENST00000470094 GOLGA8FQ08AF8 430 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 DHX8Q14562 1220 aaKnown RBP4.28□□□□□ -1.72
BRCA2-202ENST00000470094 TAF5Q15542 800 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 Q5PR19 223 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 TMEM268Q5VZI3 342 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 AADACL2Q6P093 401 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 ZNF549Q6P9A3 640 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 C9orf47Q6ZRZ4 202 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 CAMK1DQ8IU85 385 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 FTSJ3Q8IY81 847 aaKnown RBP4.28□□□□□ -1.72
BRCA2-202ENST00000470094 ANKRD44Q8N8A2 993 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 LRRC57Q8N9N7 239 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 LINS1Q8NG48 757 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 TBC1D20Q96BZ9 403 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 HERPUD2Q9BSE4 406 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 HERC2P3Q9BVR0 1158 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 B3GNT4Q9C0J1 378 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 RBM38Q9H0Z9 239 aaKnown RBP4.28□□□□□ -1.72
BRCA2-202ENST00000470094 SIRT3Q9NTG7 399 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-202ENST00000470094 UPB1Q9UBR1 384 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 FEM1BQ9UK73 627 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 RRP7AQ9Y3A4 280 aaKnown RBP4.28□□□□□ -1.72
BRCA2-202ENST00000470094 RAP2CQ9Y3L5 183 aa4.28□□□□□ -1.72
BRCA2-202ENST00000470094 RPS10-NUDT3A0A1W2PQS6 291 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 STX16-NPEPL1H3BU86 382 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 STX16O14662 325 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 STRNO43815 780 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 TMCC1O94876 653 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 HOXB2P14652 356 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 ARSAP15289 507 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 PRKCHP24723 683 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 TNFSF8P32971 234 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 SKIV2L2P42285 1042 aaKnown RBP4.27□□□□□ -1.73
BRCA2-202ENST00000470094 HALP42357 657 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 PAPOLAP51003 745 aaKnown RBP4.27□□□□□ -1.73
BRCA2-202ENST00000470094 PGGT1BP53609 377 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 ARL4CP56559 192 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 MAPK7Q13164 816 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 ODF3L2Q3SX64 289 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 CTXN3Q4LDR2 81 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 WASHC2DQ5SRD0 308 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 C2CD5Q86YS7 1000 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 FAM217AQ8IXS0 508 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 SCAIQ8N9R8 606 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 CEP70Q8NHQ1 597 aa4.27□□□□□ -1.73
BRCA2-202ENST00000470094 FAR1Q8WVX9 515 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms