RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GOLGA8SH3BPF8 625 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 MCF2LO15068 1137 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 SLC7A4O43246 635 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 PCDHGA12O60330 932 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 GFPT2O94808 682 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 DKK1O94907 266 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 RHOCP08134 193 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 SRCP12931 536 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 CHRNB2P17787 502 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 MMP8P22894 467 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 RDXP35241 583 aaKnown RBP16.73■□□□□ 0.27
COL9A3-208ENST00000469802 SOX5P35711 763 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 CCT8P50990 548 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 POLR2FP61218 127 aaKnown RBP16.73■□□□□ 0.27
COL9A3-208ENST00000469802 PPP2CBP62714 309 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 PPP2CAP67775 309 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 DLG2Q15700 870 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 AGBL4Q5VU57 503 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 Q6ZVU0 165 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 DSG4Q86SJ6 1040 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 CHCHD4Q8N4Q1 142 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 DCAF4L2Q8NA75 395 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 OR8D1Q8WZ84 308 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 CFAP57Q96MR6 1250 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 ACE2Q9BYF1 805 aaPredicted RBP16.73■□□□□ 0.27
COL9A3-208ENST00000469802 KDM4CQ9H3R0 1056 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 FAM207AQ9NSI2 230 aaPredicted RBP16.73■□□□□ 0.27
COL9A3-208ENST00000469802 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 TOR4AQ9NXH8 423 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 VPS51Q9UID3 782 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 PPM1HQ9ULR3 514 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 BTBD3Q9Y2F9 522 aa16.73■□□□□ 0.27
COL9A3-208ENST00000469802 A0A1W2PR77 199 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 E9PAM4 449 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 H0Y8X5 98 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 PLRG1O43660 514 aaKnown RBP16.72■□□□□ 0.27
COL9A3-208ENST00000469802 SNAP91O60641 907 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 ENDOD1O94919 500 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 WNT1P04628 370 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 OR14C36Q8NHC7 312 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 SETD7Q8WTS6 366 aaKnown RBP16.72■□□□□ 0.27
COL9A3-208ENST00000469802 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 HAPLN3Q96S86 360 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 C2orf49Q9BVC5 232 aaPredicted RBP16.72■□□□□ 0.27
COL9A3-208ENST00000469802 MUC3BQ9H195 1237 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 METTL5Q9NRN9 209 aaKnown RBP16.72■□□□□ 0.27
COL9A3-208ENST00000469802 MPP6Q9NZW5 540 aa16.72■□□□□ 0.27
COL9A3-208ENST00000469802 A0A0D9SEW6 157 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 A0A1B0GTQ1 180 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 LGALS16A8MUM7 142 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 PLK4O00444 970 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 WNT9AO14904 365 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 DFNA5O60443 496 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 RTN2O75298 545 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 MT-CO1P00395 513 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 ZNF18P17022 549 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 COPB1P53618 953 aaKnown RBP16.71■□□□□ 0.27
COL9A3-208ENST00000469802 GSCP56915 257 aaPredicted RBP16.71■□□□□ 0.27
COL9A3-208ENST00000469802 KRT83P78385 493 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 MYL5Q02045 173 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 PTP4A2Q12974 167 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 ACCSLQ4AC99 568 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 FKBP15Q5T1M5 1219 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 C6orf118Q5T5N4 469 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 FAM46CQ5VWP2 391 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 LRSAM1Q6UWE0 723 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 LRRC31Q6UY01 552 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.71■□□□□ 0.27
COL9A3-208ENST00000469802 ZNF783Q6ZMS7 281 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 TRIM72Q6ZMU5 477 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 TFAP2DQ7Z6R9 452 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 ADAT2Q7Z6V5 191 aaKnown RBP16.71■□□□□ 0.27
COL9A3-208ENST00000469802 SLCO6A1Q86UG4 719 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 TRIM69Q86WT6 500 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 FAM131BQ86XD5 332 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 EMC1Q8N766 993 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 PNPLA1Q8N8W4 532 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 PIP4K2CQ8TBX8 421 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 CDC6Q99741 560 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 HSD3B7Q9H2F3 369 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 NLRC4Q9NPP4 1024 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 ARHGAP20Q9P2F6 1191 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 LIMA1Q9UHB6 759 aaKnown RBP16.71■□□□□ 0.27
COL9A3-208ENST00000469802 ZMIZ1Q9ULJ6 1067 aa16.71■□□□□ 0.27
COL9A3-208ENST00000469802 APOBEC2Q9Y235 224 aaKnown RBP16.71■□□□□ 0.27
COL9A3-208ENST00000469802 FREM2Q5SZK8 3169 aa16.71■□□□□ 0.26
COL9A3-208ENST00000469802 PKD1L2Q7Z442 2459 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 C1QTNF3-AMACRE9PGA6 284 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 KCNK3O14649 394 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 CTSLP07711 333 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 TPM2P07951 284 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 UNGP13051 313 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-208ENST00000469802 CD38P28907 300 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 CLCN6P51797 869 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 C21orf59P57076 290 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 NRG1Q02297 640 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-208ENST00000469802 CNTN1Q12860 1018 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 SUZ12Q15022 739 aaKnown RBP16.7■□□□□ 0.26
COL9A3-208ENST00000469802 SYCP1Q15431 976 aa16.7■□□□□ 0.26
COL9A3-208ENST00000469802 STX1AQ16623 288 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms