RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 HEATR6Q6AI08 1181 aaKnown RBP8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 TXNRD3NBQ6F5E7 133 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 LAIR1Q6GTX8 287 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 RWDD4Q6NW29 188 aaKnown RBP8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 C22orf39Q6P5X5 142 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 RAD9BQ6WBX8 426 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 NPWQ8N729 165 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 OR7D4Q8NG98 312 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 SLC35G2Q8TBE7 412 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 FAM122AQ96E09 287 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 LOXL4Q96JB6 756 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 SPACA7Q96KW9 195 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 CALR3Q96L12 384 aaKnown RBP8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 CSPG4P5Q96PW8 444 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 BAG1Q99933 345 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 ZNF670Q9BS34 389 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 DHX35Q9H5Z1 703 aaKnown RBP8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 ZWILCHQ9H900 591 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 PDFQ9HBH1 243 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 PCDH18Q9HCL0 1135 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 CWC15Q9P013 229 aaKnown RBP8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 PCSK1NQ9UHG2 260 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 SLC25A13Q9UJS0 675 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 WDR87Q6ZQQ6 2873 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 SPAG17Q6Q759 2223 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 ATG2BQ96BY7 2078 aa8.49□□□□□ -1.05
TRAPPC3-206ENST00000469757 IGHV1OR15-9A0A0B4J2B8 117 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 TTC34A8MYJ7 566 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 GOLGA6L6A8MZA4 724 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 H3BRJ5 948 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PJA2O43164 708 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 CREB3O43889 395 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SIN3BO75182 1162 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 ZNF821O75541 412 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 EPN2O95208 641 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 CD160O95971 181 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 KRT7P08729 469 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SRCP12931 536 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 GLDCP23378 1020 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 HOXD11P31277 338 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SLC1A1P43005 524 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 VAV2P52735 878 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 NDST2P52849 883 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 RPS14P62263 151 aaKnown RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SLC20A2Q08357 652 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SRSF5Q13243 272 aaKnown RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SERINC3Q13530 473 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 BYSLQ13895 437 aaKnown RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SPA17Q15506 151 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 HADHQ16836 314 aaKnown RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SMTNL2Q2TAL5 461 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PLK5Q496M5 336 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 USP39Q53GS9 565 aaKnown RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PEAR1Q5VY43 1037 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 ZNF776Q68DI1 518 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 RETSATQ6NUM9 610 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 USP30Q70CQ3 517 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 ASCL5Q7RTU5 278 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 CPNE8Q86YQ8 564 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 ARHGAP12Q8IWW6 846 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PLPP6Q8IY26 295 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 LZTR1Q8N653 840 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PCDH20Q8N6Y1 951 aaKnown RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 ZNF366Q8N895 744 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 CCDC112Q8NEF3 446 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 CASKIN2Q8WXE0 1202 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PTPRN2Q92932 1015 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 ISG20Q96AZ6 181 aaKnown RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 TPSD1Q9BZJ3 242 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PCED1AQ9H1Q7 454 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 DUSP15Q9H1R2 295 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PRDM16Q9HAZ2 1276 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 ATP13A1Q9HD20 1204 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 BCCIPQ9P287 314 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SUN2Q9UH99 717 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 DNAI1Q9UI46 699 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SLCO3A1Q9UIG8 710 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 MBD1Q9UIS9 605 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 SCML1Q9UN30 329 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 PCDHA13Q9Y5I0 950 aa8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 EPN1Q9Y6I3 576 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC3-206ENST00000469757 RCCD1A6NED2 376 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 C3orf70A6NLC5 250 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 CBX4O00257 560 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 PSTPIP1O43586 416 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 KDELR3O43731 214 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 BUB1BO60566 1050 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 PRAMEF11O60813 436 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 LRP3O75074 770 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 IPO7O95373 1038 aaKnown RBP8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 ADH1BP00325 375 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 MT-CO1P00395 513 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 VAV1P15498 845 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 ERCC2P18074 760 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 BCKDHBP21953 392 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 HOXD12P35452 270 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 ACVRL1P37023 503 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 NNMTP40261 264 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 ARL4AP40617 200 aa8.47□□□□□ -1.05
TRAPPC3-206ENST00000469757 MAGEA1P43355 309 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms