RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 VPS28Q9UK41 221 aa13.03□□□□□ -0.32
GAPVD1-214ENST00000469528 PAXBP1Q9Y5B6 917 aa13.03□□□□□ -0.32
GAPVD1-214ENST00000469528 PRNPP04156 253 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 USP8P40818 1118 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 CDH4P55283 916 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 DAB2P98082 770 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 PTK2Q05397 1052 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 AUHQ13825 339 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 TTI2Q6NXR4 508 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 C11orf57Q6ZUT1 292 aaPredicted RBP13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 SPATS2Q86XZ4 545 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 DEFB106AQ8N104 65 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 SLC39A7Q92504 469 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 IFT43Q96FT9 208 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 KREMEN1Q96MU8 473 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 C2orf49Q9BVC5 232 aaPredicted RBP13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 SRRTQ9BXP5 876 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 MUC3BQ9H195 1237 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 PRORYQ9H606 182 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 WDCPQ9H6R7 721 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 KLHL11Q9NVR0 708 aa13.02□□□□□ -0.33
GAPVD1-214ENST00000469528 SYNJ2BP-COX16A0A087WUM0 186 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 TEX51A0A1B0GUA7 166 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 PPP1R3GB7ZBB8 358 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 CBX4O00257 560 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 ATXN7O15265 892 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 F9P00740 461 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 CALCAP01258 141 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 VAV1P15498 845 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 AKT2P31751 481 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 NOS2P35228 1153 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 KRT9P35527 623 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 RECQLP46063 649 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 PPP2CBP62714 309 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 PPP2CAP67775 309 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 KCNMA1Q12791 1236 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 PAK1Q13153 545 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 NME3Q13232 169 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 PDCLQ13371 301 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 LRRC31Q6UY01 552 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 GPR155Q7Z3F1 870 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 ZDHHC17Q8IUH5 632 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 CREBRFQ8IUR6 639 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 SH2D3CQ8N5H7 860 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 ATP11CQ8NB49 1132 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 SNIP1Q8TAD8 396 aaKnown RBP13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 PPP1R16AQ96I34 528 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 BBC3Q96PG8 261 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 SLC2A13Q96QE2 648 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 DUSP23Q9BVJ7 150 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 ABCG4Q9H172 646 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 SYNCQ9H7C4 482 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 USP29Q9HBJ7 922 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 COX16Q9P0S2 106 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 MAN1B1Q9UKM7 699 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 VANGL2Q9ULK5 521 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 TBC1D30Q9Y2I9 924 aa13.01□□□□□ -0.33
GAPVD1-214ENST00000469528 SIGLEC6O43699 453 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 BNIP3LO60238 219 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 MT-CO3P00414 261 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 THEGLP0DJG4 465 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 PRKCSHP14314 528 aaPredicted RBP13□□□□□ -0.33
GAPVD1-214ENST00000469528 CD44P16070 742 aaKnown RBP13□□□□□ -0.33
GAPVD1-214ENST00000469528 HNRNPA2B1P22626 353 aaKnown RBP13□□□□□ -0.33
GAPVD1-214ENST00000469528 DGKAP23743 735 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 ITPKBP27987 946 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 CHRNA3P32297 505 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 CLCN6P51797 869 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 SLC20A2Q08357 652 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 PROX2Q3B8N5 592 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 C5orf22Q49AR2 442 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 BRMS1LQ5PSV4 323 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 AGBL4Q5VU57 503 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 BROXQ5VW32 411 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 OR6B2Q6IFH4 312 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 CXorf57Q6NSI4 855 aaKnown RBP13□□□□□ -0.33
GAPVD1-214ENST00000469528 GBP6Q6ZN66 633 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 KANSL1Q7Z3B3 1105 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 ZSCAN30Q86W11 494 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 DCBLD1Q8N8Z6 715 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 C1orf131Q8NDD1 294 aaKnown RBP13□□□□□ -0.33
GAPVD1-214ENST00000469528 OR4C6Q8NH72 309 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 ALG14Q96F25 216 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 FEM1CQ96JP0 617 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 ZNF578Q96N58 590 aaPredicted RBP13□□□□□ -0.33
GAPVD1-214ENST00000469528 SIK2Q9H0K1 926 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 NCKIPSDQ9NZQ3 722 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 SARDHQ9UL12 918 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 STAP1Q9ULZ2 295 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 PCDHGC3Q9UN70 934 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 HS3ST2Q9Y278 367 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 HS3ST3A1Q9Y663 406 aa13□□□□□ -0.33
GAPVD1-214ENST00000469528 PLXNA2O75051 1894 aa12.99□□□□□ -0.33
GAPVD1-214ENST00000469528 M0QYT0 321 aa12.99□□□□□ -0.33
GAPVD1-214ENST00000469528 KPNA3O00505 521 aaPredicted RBP12.99□□□□□ -0.33
GAPVD1-214ENST00000469528 SLC31A1O15431 190 aa12.99□□□□□ -0.33
GAPVD1-214ENST00000469528 BRINP1O60477 761 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms