RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 TBRG1Q3YBR2 411 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 LRRTM4Q86VH4 590 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 PNPLA1Q8N8W4 532 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 FSIP1Q8NA03 581 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 NAXEQ8NCW5 288 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 LMO3Q8TAP4 145 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 SDCCAG3Q96C92 435 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 PRR11Q96HE9 360 aaPredicted RBP3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 DOCK7Q96N67 2140 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 SAP30LQ9HAJ7 183 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 KCNK9Q9NPC2 374 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 VPS45Q9NRW7 570 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 RXFP3Q9NSD7 469 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 ARL8BQ9NVJ2 186 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 KCND3Q9UK17 655 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 RAB21Q9UL25 225 aa3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 TRPC5Q9UL62 973 aaPredicted RBP3.63□□□□□ -1.83
SOX2-OT-204ENST00000469278 LOC105369274A0A096LPK9 316 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 LOC102723532A0A0G2JNH3 316 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 TTC34A8MYJ7 566 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 B9A039 149 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 M0QYT0 321 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 EPB41L2O43491 1005 aaKnown RBP3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 PRAMEF2O60811 474 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 FAM155BO75949 473 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 TMIGD3P0DMS9 266 aaPredicted RBP3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 SLC12A2P55011 1212 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 FAM3BP58499 235 aaPredicted RBP3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 RAE1P78406 368 aaKnown RBP3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 UBE3AQ05086 875 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 TBX2Q13207 712 aaPredicted RBP3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 TRPC3Q13507 836 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 DNASE1L3Q13609 305 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 ODF3L2Q3SX64 289 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 GALNTL6Q49A17 601 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 WASHC2DQ5SRD0 308 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 DGAT2L7PQ6IED9 249 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 WDR93Q6P2C0 686 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 RTL10Q7L3V2 364 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 OR4N4Q8N0Y3 316 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 ANKRD44Q8N8A2 993 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 BCAS4Q8TDM0 211 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 NPIPB3Q92617 1050 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 PIGSQ96S52 555 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 SEC62Q99442 399 aaKnown RBP3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 MECRQ9BV79 373 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 NUAK2Q9H093 628 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 FZD3Q9NPG1 666 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 IFT80Q9P2H3 777 aaPredicted RBP3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 MYO6Q9UM54 1294 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 SUFUQ9UMX1 484 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 CRYL1Q9Y2S2 319 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 DERAQ9Y315 318 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 MMP24Q9Y5R2 645 aa3.62□□□□□ -1.83
SOX2-OT-204ENST00000469278 A0A1W2PPC1 479 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 SLC38A8A6NNN8 435 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 ERI2A8K979 691 aaKnown RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 H0YGN5 161 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 DDNO94850 711 aaPredicted RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 TFRCP02786 760 aaKnown RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 ALDOAP04075 364 aaKnown RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 CKMT1AP12532 417 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 CPA1P15085 419 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 MATN1P21941 496 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 KRT9P35527 623 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 JAK3P52333 1124 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 RBM6P78332 1123 aaKnown RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 GPC5P78333 572 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 GOLGA8FQ08AF8 430 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 LMOD3Q0VAK6 560 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 DLGAP5Q15398 846 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 AAK1Q2M2I8 961 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 CTXN3Q4LDR2 81 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 NUGGCQ68CJ6 796 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 C16orf89Q6UX73 402 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 ESX1Q8N693 406 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 C12orf76Q8N812 135 aaPredicted RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 SRFBP1Q8NEF9 429 aaKnown RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 OR52L2PQ8NGH6 319 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 EDC3Q96F86 508 aaKnown RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 RBM17Q96I25 401 aaKnown RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 KAZALD1Q96I82 304 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 MPP4Q96JB8 637 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 MAELQ96JY0 434 aaKnown RBP3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 TM2D2Q9BX73 214 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 SLC26A6Q9BXS9 759 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 SEZ6LQ9BYH1 1024 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 TM6SF1Q9BZW5 370 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 G6PC2Q9NQR9 355 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 PDP2Q9P2J9 529 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 SLC13A4Q9UKG4 626 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 PNMA2Q9UL42 364 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 SLC12A4Q9UP95 1085 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 ZBTB1Q9Y2K1 713 aa3.61□□□□□ -1.83
SOX2-OT-204ENST00000469278 CCDC196A0A1B0GTZ2 297 aa3.6□□□□□ -1.83
SOX2-OT-204ENST00000469278 AGAP5A6NIR3 686 aa3.6□□□□□ -1.83
SOX2-OT-204ENST00000469278 MBD3L5A6NJ08 208 aaPredicted RBP3.6□□□□□ -1.83
SOX2-OT-204ENST00000469278 C3orf70A6NLC5 250 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms