RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FCRL5Q96RD9 977 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 PRMT1Q99873 361 aaKnown RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 EMILIN2Q9BXX0 1053 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 IL22Q9GZX6 179 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 GLOD4Q9HC38 313 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 KCNK9Q9NPC2 374 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 CASS4Q9NQ75 786 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 MPP6Q9NZW5 540 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 IPO11Q9UI26 975 aaKnown RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 LZTS1Q9Y250 596 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 MAGEB16A2A368 324 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 TYW5A2RUC4 315 aaKnown RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 ERICH4A6NGS2 130 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 FAM159BA6NKW6 160 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 F5H423 210 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 NDUFAB1O14561 156 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 CACNG3O60359 315 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 LPXNO60711 386 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 ZWINTO95229 277 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 TBX18O95935 607 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 FAM107AO95990 144 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 OAS1P00973 400 aaKnown RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 LRG1P02750 347 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 SYN1P17600 705 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 PFKLP17858 780 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 MGAT1P26572 445 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 ETFBP38117 255 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 PAPOLAP51003 745 aaKnown RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 CDH4P55283 916 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 SESN2P58004 480 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 TNK2Q07912 1038 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 IL10RBQ08334 325 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 MPP3Q13368 585 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 CRYMQ14894 314 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 EFTUD2Q15029 972 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 ZSCAN26Q16670 478 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 TMCO4Q5TGY1 634 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 KCTD11Q693B1 232 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 TTC19Q6DKK2 380 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 FBXL22Q6P050 247 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 CHST9Q7L1S5 443 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 TFAP2DQ7Z6R9 452 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 TMCO2Q7Z6W1 182 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 SPATS2Q86XZ4 545 aaKnown RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 ZNF354CQ86Y25 554 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 IGDCC3Q8IVU1 814 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 CTAGE3PQ8IX95 158 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 LGI2Q8N0V4 545 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 PPM1NQ8N819 430 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 NETO2Q8NC67 525 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 SP7Q8TDD2 431 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 PTCD2Q8WV60 388 aaKnown RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 ATXN2LQ8WWM7 1075 aaKnown RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 ZNF599Q96NL3 588 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 TBL1YQ9BQ87 522 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 MLPHQ9BV36 600 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 FSD1LQ9BXM9 530 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 PPANQ9NQ55 473 aaKnown RBP9.53□□□□□ -0.88
SMC1A-205ENST00000469129 VPS45Q9NRW7 570 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 SYBUQ9NX95 663 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 NSMCE4AQ9NXX6 385 aa9.53□□□□□ -0.88
SMC1A-205ENST00000469129 ATG2AQ2TAZ0 1938 aa9.52□□□□□ -0.88
SMC1A-205ENST00000469129 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 FAM237BA0A1B0GVD1 139 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 A0A1B0GVM2 712 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 GMNCA6NCL1 334 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 TCAF2A6NFQ2 919 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 TM9SF1O15321 606 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 TEX28O15482 410 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 COCHO43405 550 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 CLDN11O75508 207 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 USP1O94782 785 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 ALDH1A2O94788 518 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 FGF19O95750 216 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 MT-ND3P03897 115 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 HLA-DQB2P05538 268 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 SNRPAP09012 282 aaKnown RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 MBL2P11226 248 aaPredicted RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 CA4P22748 312 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 CDC25CP30307 473 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 OR1E1P30953 314 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 CORO1AP31146 461 aaKnown RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 CD68P34810 354 aaPredicted RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 IL9RQ01113 521 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 UBE3AQ05086 875 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 MTM1Q13496 603 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 SPARCL1Q14515 664 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 POLD3Q15054 466 aaPredicted RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 ARTNQ5T4W7 220 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 MARC1Q5VT66 337 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 ARHGAP36Q6ZRI8 547 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 MICALCLQ6ZW33 695 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 RTL10Q7L3V2 364 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 CYP4X1Q8N118 509 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 AGGF1Q8N302 714 aaeCLIP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 ANKRD42Q8N9B4 389 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 PPHLN1Q8NEY8 458 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms