RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 ATP13A1Q9HD20 1204 aa13.4□□□□□ -0.26
SCAP-210ENST00000468965 ZDHHC4Q9NPG8 344 aa13.4□□□□□ -0.26
SCAP-210ENST00000468965 DONSONQ9NYP3 566 aa13.4□□□□□ -0.26
SCAP-210ENST00000468965 DTLQ9NZJ0 730 aa13.4□□□□□ -0.26
SCAP-210ENST00000468965 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
SCAP-210ENST00000468965 MRPS17Q9Y2R5 130 aaKnown RBP13.4□□□□□ -0.26
SCAP-210ENST00000468965 ACTL7AQ9Y615 435 aa13.4□□□□□ -0.26
SCAP-210ENST00000468965 CTAGE9A4FU28 777 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 ARHGAP42A6NI28 874 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 FAM170BA6NMN3 283 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 DFFAO00273 331 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 CD160O95971 181 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 ZFXP17010 805 aaPredicted RBP13.39□□□□□ -0.27
SCAP-210ENST00000468965 POLR2EP19388 210 aaKnown RBP13.39□□□□□ -0.27
SCAP-210ENST00000468965 TGM2P21980 687 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 ETFBP38117 255 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 CETN2P41208 172 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 STK19P49842 368 aaPredicted RBP13.39□□□□□ -0.27
SCAP-210ENST00000468965 ARF5P84085 180 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 GALNT2Q10471 571 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 KLF1Q13351 362 aaPredicted RBP13.39□□□□□ -0.27
SCAP-210ENST00000468965 EIF4HQ15056 248 aaKnown RBP13.39□□□□□ -0.27
SCAP-210ENST00000468965 PTPRNQ16849 979 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 PAPD7Q5XG87 772 aaKnown RBP13.39□□□□□ -0.27
SCAP-210ENST00000468965 IL31Q6EBC2 164 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 PKN3Q6P5Z2 889 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 Q6ZS52 159 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 USP33Q8TEY7 942 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 COG1Q8WTW3 980 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 HAUS1Q96CS2 278 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 MYO19Q96H55 970 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 MRGPRX3Q96LB0 322 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 OSBPL9Q96SU4 736 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 ACOX2Q99424 681 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 OSBPL6Q9BZF3 934 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 EPHX3Q9H6B9 360 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 THAP10Q9P2Z0 257 aaPredicted RBP13.39□□□□□ -0.27
SCAP-210ENST00000468965 SNX12Q9UMY4 172 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 HEY1Q9Y5J3 304 aa13.39□□□□□ -0.27
SCAP-210ENST00000468965 KMT2EQ8IZD2 1858 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 J3KR12 359 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 TNFRSF10AO00220 468 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 CBX4O00257 560 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 TIMM44O43615 452 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 KDELR3O43731 214 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 RNF40O75150 1001 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 MT-CO1P00395 513 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 ASLP04424 464 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 DLDP09622 509 aaKnown RBP13.38□□□□□ -0.27
SCAP-210ENST00000468965 HNRNPLP14866 589 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCAP-210ENST00000468965 TIE1P35590 1138 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 GARSP41250 739 aaKnown RBP13.38□□□□□ -0.27
SCAP-210ENST00000468965 ECT2LQ008S8 904 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 GAS6Q14393 721 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 ZNF234Q14588 700 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 FBXO43Q4G163 708 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 DGKKQ5KSL6 1271 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 LINGO4Q6UY18 593 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 LEKR1Q6ZMV7 388 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 NUDT18Q6ZVK8 323 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
SCAP-210ENST00000468965 RASGEF1CQ8N431 466 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 ZNF513Q8N8E2 541 aaPredicted RBP13.38□□□□□ -0.27
SCAP-210ENST00000468965 FLCNQ8NFG4 579 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 LRRN4Q8WUT4 740 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 UCMAQ8WVF2 138 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 ACDQ96AP0 544 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 CLDN23Q96B33 292 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 PBKQ96KB5 322 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 RPL10LQ96L21 214 aaKnown RBP13.38□□□□□ -0.27
SCAP-210ENST00000468965 OLFM3Q96PB7 478 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 NELL2Q99435 816 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 C2orf49Q9BVC5 232 aaPredicted RBP13.38□□□□□ -0.27
SCAP-210ENST00000468965 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 PDFQ9HBH1 243 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 IPO11Q9UI26 975 aaKnown RBP13.38□□□□□ -0.27
SCAP-210ENST00000468965 ERVW-1Q9UQF0 538 aa13.38□□□□□ -0.27
SCAP-210ENST00000468965 R3HDM2Q9Y2K5 976 aaKnown RBP13.38□□□□□ -0.27
SCAP-210ENST00000468965 APOC4-APOC2K7ER74 178 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 STK25O00506 426 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 CEP104O60308 925 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 MAFKO60675 156 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 PRAMEF11O60813 436 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 TJP3O95049 919 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 APOC2P02655 101 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 ATP5BP06576 529 aaKnown RBP13.37□□□□□ -0.27
SCAP-210ENST00000468965 IL12RB1P42701 662 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
SCAP-210ENST00000468965 MRPS21P82921 87 aaKnown RBP13.37□□□□□ -0.27
SCAP-210ENST00000468965 SULT2A1Q06520 285 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 LRRC32Q14392 662 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 NOMO1Q15155 1222 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 SIX1Q15475 284 aaPredicted RBP13.37□□□□□ -0.27
SCAP-210ENST00000468965 C2orf27AQ580R0 203 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 B4GALNT4Q76KP1 1039 aa13.37□□□□□ -0.27
SCAP-210ENST00000468965 ZNF354CQ86Y25 554 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms